Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_J07
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   3.6  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   3.6  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   3.6  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   3.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.2  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    21   8.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   8.2  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 373 LSSNLIHVETHGKYDCR*AEYNHCCK 296
           LS+  IH   + KY+     YN+ CK
Sbjct: 85  LSNRTIHNNNNYKYNYNNNNYNNNCK 110


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 373 LSSNLIHVETHGKYDCR*AEYNHCCK 296
           LS+  IH   + KY+     YN+ CK
Sbjct: 85  LSNKTIHNNNNYKYNYNNNNYNNNCK 110


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 373 LSSNLIHVETHGKYDCR*AEYNHCCK 296
           LS+  IH   + KY+     YN+ CK
Sbjct: 85  LSNKTIHNNNNYKYNYNNNNYNNNCK 110


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 373 LSSNLIHVETHGKYDCR*AEYNHCCK 296
           LS+  IH   + KY+     YN+ CK
Sbjct: 85  LSNKTIHNNNNYKYNYNNNNYNNNCK 110


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 114 IRPRRVSPPMSVIIQSGIARLTMAKT 37
           +RPR +SP   V I + +  L +  T
Sbjct: 617 VRPRYISPASQVCIAAALIALQIVLT 642


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 114 IRPRRVSPPMSVIIQSGIARLTMAKT 37
           +RPR +SP   V I + +  L +  T
Sbjct: 707 VRPRYISPASQVCIAAALIALQIVLT 732


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 41  FAIVSLAMPDWIITDIGGDTRLGLMW 118
           + + SLA+ D I+  +G    L L W
Sbjct: 77  YYLFSLAISDLILLVLGLPNELSLFW 102


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 416 ILFVLSLWITVI 451
           ILF+LSL IT++
Sbjct: 8   ILFILSLTITIV 19


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 20  LFMAADVFAIVSLAMPDWIITDIG 91
           L +  +VF  + LAM  W  T+IG
Sbjct: 46  LLVFYEVFRYLELAMIRWKDTEIG 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,377
Number of Sequences: 438
Number of extensions: 3442
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)