Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_H02
(520 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.5
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 2.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 2.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 2.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 2.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 5.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 5.7
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 5.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 7.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 7.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 7.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 7.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 7.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 7.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 7.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 7.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 7.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 7.6
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 492 FSYCFVCFNFIQFMV 448
F CFVCFN + +++
Sbjct: 412 FPVCFVCFNLMYWII 426
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 492 FSYCFVCFNFIQFMV 448
F CFVCFN + +++
Sbjct: 412 FPVCFVCFNLMYWII 426
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.8 bits (49), Expect = 1.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 492 FSYCFVCFNFIQFMV 448
F CFVCFN + +++
Sbjct: 350 FPVCFVCFNLMYWII 364
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 174 KINKIEEHDTVLVVN 188
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 174 KINKIEEHDTVLVVN 188
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 174 KINKIEEHDTVLVVN 188
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 174 KINKIEEHDTVLVVN 188
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S LLN+ N+N+YK
Sbjct: 305 SSLLNNTIHNNNNYK 319
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S LLN+ N+N+YK
Sbjct: 316 SSLLNNTIHNNNNYK 330
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 174 KINKIEEHDTVLVVN 188
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S LLN+ N+N+YK
Sbjct: 305 SSLLNNTIHNNNNYK 319
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKIE H+TV ++
Sbjct: 185 KINKIEEHDTVLVVN 199
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.4 bits (43), Expect = 5.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 429 EINL*SFELKKKLFNSSEFLLY*TQKY 349
E++L ++L +K NSSE +Q+Y
Sbjct: 184 ELHLTEYKLVEKWVNSSEIFYTTSQQY 210
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 350 YFWV*YNRNSELLNSFFFNSN 412
++W Y SE +N + NSN
Sbjct: 441 FYWFAYLSRSERINYYNVNSN 461
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 148 FCYRSFNTIFTLKN 107
F Y SFNT F L N
Sbjct: 104 FIYNSFNTGFALGN 117
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 231 KSISFLHLRIPQHFVTLILKNSI 163
KS++F + IP H++ L +I
Sbjct: 129 KSVTFQTMTIPNHYLWLYKDKTI 151
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S L N++ +N+N+YK
Sbjct: 83 SSLSNNYNYNNNNYK 97
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S L N++ +N+N+YK
Sbjct: 83 SSLSNNYNYNNNNYK 97
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S L N++ +N+N+YK
Sbjct: 83 SSLSNNYNYNNNNYK 97
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 7.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S LLN+ N+N+YK
Sbjct: 316 SSLLNNTIHNNNNYK 330
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKI+ H+TV ++
Sbjct: 185 KINKIKEHDTVLVVN 199
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 377 SELLNSFFFNSNDYK 421
S L N++ +N+N+YK
Sbjct: 316 SSLSNNYNYNNNNYK 330
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKI+ H+TV ++
Sbjct: 185 KINKIKEHDTVLVVN 199
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKI+ H+TV ++
Sbjct: 185 KINKIKEHDTVLVVN 199
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKI+ H+TV ++
Sbjct: 174 KINKIKEHDTVLVVN 188
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKI+ H+TV ++
Sbjct: 190 KINKIKEHDTVLVVN 204
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKI+ H+TV ++
Sbjct: 185 KINKIKEHDTVLVVN 199
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 454 KLNKIETHETVAKIS 498
K+NKI+ H+TV ++
Sbjct: 185 KINKIKEHDTVLVVN 199
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,214
Number of Sequences: 438
Number of extensions: 2209
Number of successful extensions: 45
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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