Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_F14
         (453 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.67 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   0.67 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   0.89 
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   3.6  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   3.6  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   4.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   6.3  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   8.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.3  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +3

Query: 276 VAFVKQTEMYVPVSKTVLYLNL----KHLMFCILGVSAYSGKSDFM 401
           V ++  TE++     T+  LN     +  +F   GVSA +GKS+++
Sbjct: 363 VKYIPNTEVFNDTKITITGLNAVTTYRFQVFAENGVSALAGKSEYV 408


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 282  FVKQTEMYVPVSKTVLYLNLKHLMFCIL-GVSAYSGKSDFMYNE 410
            F+    + VPV   +L + +  ++ C+L G    S K D +Y +
Sbjct: 1581 FMANLNLVVPVVAAILVIIVAVIVICVLRGKGHGSDKDDVVYQQ 1624


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 287 YKSYNLHYDKKQKSQNEELKKR 222
           YKSY  + DK+ K  N E+  R
Sbjct: 454 YKSYPNYIDKETKDMNLEISTR 475


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 67  YILAFLLSSLTCV 105
           YIL F+L ++TCV
Sbjct: 4   YILLFVLVTITCV 16


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 67  YILAFLLSSLTCV 105
           YIL F+L ++TCV
Sbjct: 4   YILLFVLVTITCV 16


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 82  LLSSLTCV*FLGFFLSMSQYFQLKTISAKFN 174
           ++S L C  F    + ++ YF   T+S K N
Sbjct: 1   MISMLRCTFFFLSVILITSYFVTPTMSIKCN 31


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 318 KTVLYLNLKHLMFCILGVSAYSGKSDFMYNE*NNND 425
           KTV Y N K   +   G  +Y     F+    NN+D
Sbjct: 7   KTVSYTNKKDESYFDEGGRSYGKGRGFIIQNNNNDD 42


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 314 FKNCVVLKFEAFD 352
           F  C++ KF A+D
Sbjct: 62  FSECLIKKFNAYD 74


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 158 FRPNLTDSKHFN 193
           F P  TDS+H++
Sbjct: 166 FEPRATDSRHYD 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,905
Number of Sequences: 438
Number of extensions: 2130
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)