Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP08_F_E07
         (538 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.6  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   6.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.0  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 192 PQAGFQYERKQREMIAKE 245
           P +GF  E +Q+E + KE
Sbjct: 639 PISGFDLEPRQKEFLPKE 656


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 46  HSVHYNKYNKIVFY 87
           +++H N YNK ++Y
Sbjct: 321 NTIHNNNYNKKLYY 334


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +3

Query: 174 DNPTFDPQAGFQYERKQREMIAKEEDLISARIPNKYRDYCAHYLLDYQVCRYKEMPLL 347
           DN T    AGF    K    +   E+  S  +  + R+Y +HY+    +   K+ P++
Sbjct: 429 DNST---SAGFSQTNKT--WLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVI 481


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,709
Number of Sequences: 438
Number of extensions: 2793
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)