Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_B18
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 256 7e-68
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 256 7e-68
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 256 7e-68
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 256 7e-68
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 251 1e-66
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 67 6e-11
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.39
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 3.6
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 3.6
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 3.6
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 4.7
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 4.7
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 4.7
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 4.7
AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens ... 30 6.3
Z75746-3|CAI41986.1| 360|Homo sapiens nuclear RNA export factor... 30 8.3
AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens ... 30 8.3
AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens ... 30 8.3
AJ277660-1|CAC20434.1| 360|Homo sapiens nuclear RNA export fact... 30 8.3
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 256 bits (626), Expect = 7e-68
Identities = 120/136 (88%), Positives = 128/136 (94%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 498
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 499 GRAGTVRRQAVDVSPL 546
GRAGTVRRQAVDVSPL
Sbjct: 129 GRAGTVRRQAVDVSPL 144
Score = 79.4 bits (187), Expect = 1e-14
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +2
Query: 488 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 655
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 256 bits (626), Expect = 7e-68
Identities = 120/136 (88%), Positives = 128/136 (94%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 498
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 499 GRAGTVRRQAVDVSPL 546
GRAGTVRRQAVDVSPL
Sbjct: 129 GRAGTVRRQAVDVSPL 144
Score = 79.4 bits (187), Expect = 1e-14
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +2
Query: 488 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 655
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 256 bits (626), Expect = 7e-68
Identities = 120/136 (88%), Positives = 128/136 (94%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 498
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 499 GRAGTVRRQAVDVSPL 546
GRAGTVRRQAVDVSPL
Sbjct: 129 GRAGTVRRQAVDVSPL 144
Score = 79.4 bits (187), Expect = 1e-14
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +2
Query: 488 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 655
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 256 bits (626), Expect = 7e-68
Identities = 120/136 (88%), Positives = 128/136 (94%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 498
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 499 GRAGTVRRQAVDVSPL 546
GRAGTVRRQAVDVSPL
Sbjct: 129 GRAGTVRRQAVDVSPL 144
Score = 79.4 bits (187), Expect = 1e-14
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +2
Query: 488 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 655
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 251 bits (615), Expect = 1e-66
Identities = 118/136 (86%), Positives = 126/136 (92%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 319 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 498
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 499 GRAGTVRRQAVDVSPL 546
GRAGTVRRQAVDVSPL
Sbjct: 129 GRAGTVRRQAVDVSPL 144
Score = 79.4 bits (187), Expect = 1e-14
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +2
Query: 488 RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINA 655
R G+V R V PL RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 130 RAGTVRRQAVDVSPL-----RRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 304 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 459
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 66.9 bits (156), Expect = 6e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +2
Query: 563 AIWLLCTGAREAAFRNIKTIAECVADELINA 655
AIWLLCTGAREAAFRNIKTIAEC+ADELINA
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINA 31
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.39
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 275
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVH 281
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVH 281
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 367 CHCSDRASLESL*GAPRLGTGLYGNACVH 281
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 220 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 363
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>AK094875-1|BAC04446.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ37556 fis, clone BRCAN2028545. ).
Length = 149
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1
Query: 655 CIN*FICNTLCDCFNISECSLTCTCAQKPDCLVDSAPRV 539
C ++C +C C + C C CA C+V + RV
Sbjct: 102 CACVYVCKRVCTCACVCMCVQVCMCASVHMCIVCVSVRV 140
>Z75746-3|CAI41986.1| 360|Homo sapiens nuclear RNA export factor 3
protein.
Length = 360
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 534 CFTLGAESTKQSGFCAQVHVRLHSEILKQSQSV 632
CF++ + SGFC+++H LH +Q QSV
Sbjct: 326 CFSVNGVFKEVSGFCSRLHPDLHCYPWQQFQSV 358
>AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ44741 fis, clone BRACE3027931. ).
Length = 398
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 MCKSLICLCRTTFPLKRSTQNIYLIQLA 277
+CKS C+C +T + ST+ Y QLA
Sbjct: 259 VCKSTYCICNSTHCVCNSTRTAYATQLA 286
>AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ12986 fis, clone NT2RP3000055. ).
Length = 171
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 MCKSLICLCRTTFPLKRSTQNIYLIQLA 277
+CKS C+C +T + ST+ Y QLA
Sbjct: 32 VCKSTYCICNSTHCVCNSTRTAYATQLA 59
>AJ277660-1|CAC20434.1| 360|Homo sapiens nuclear RNA export factor
3 protein.
Length = 360
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 534 CFTLGAESTKQSGFCAQVHVRLHSEILKQSQSV 632
CF++ + SGFC+++H LH +Q QSV
Sbjct: 326 CFSVNGVFKEVSGFCSRLHPDLHCYPWQQFQSV 358
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,972,741
Number of Sequences: 237096
Number of extensions: 2005301
Number of successful extensions: 4468
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4463
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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