Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_B04
(655 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 35 8e-04
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 34 0.001
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.030
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.37
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.37
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.48
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.1
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 6.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 7.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 34.7 bits (76), Expect = 8e-04
Identities = 34/117 (29%), Positives = 54/117 (46%)
Frame = +2
Query: 116 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 295
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 296 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 466
+ + E + + I + ++ K + + +ID+PGH DF + D A
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCA 112
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/117 (29%), Positives = 54/117 (46%)
Frame = +2
Query: 116 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 295
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 296 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 466
+ + E + + I + ++ K + + +ID+PGH DF + D A
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAK-YYVTIIDAPGHRDFIKNMITGTSQADCA 112
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 0.030
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 143 MSVIAHVDHGKSTLTDSL 196
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 374 EKGFLINLIDSPGHVDFSSEVTAALRVTD 460
E G + +D+PGH F S +TD
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITD 218
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 481 TVCLVCVYKPKQYCVRLLP 537
TV LVC+Y PK Y + P
Sbjct: 749 TVTLVCLYSPKIYIILFQP 767
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.8 bits (54), Expect = 0.37
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 481 TVCLVCVYKPKQYCVRLLP 537
TV LVC+Y PK Y + P
Sbjct: 839 TVTLVCLYSPKIYIILFQP 857
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.48
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 140 NMSVIAHVDHGKSTLTDSL 196
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 498 THQTHSQQPPRAPSVTRSAAVTS 430
THQ PP +P +T +A T+
Sbjct: 1358 THQLIVHAPPHSPQITLTATTTN 1380
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 383 FLINLIDSPGHVDFSSEVTAALRVTDGA 466
+ + +ID+PGH DF + D A
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCA 39
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 383 FLINLIDSPGHVDFSSEVTAALRVTDGA 466
+ + +ID+PGH DF + D A
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCA 55
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 121 VHHPTDLVYREIHH 80
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 302 ISMFFELEEKDLVFITNPDQREKSEKGFLI 391
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +1
Query: 448 PCH*WSPWWLLTVCLVCV 501
PC W W +T +CV
Sbjct: 487 PCCWWKICWTITTPAICV 504
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +1
Query: 448 PCH*WSPWWLLTVCLVCV 501
PC W W +T +CV
Sbjct: 540 PCCWWKICWTITTPAICV 557
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 302 ISMFFELEEKDLVFITNPDQREKSEKGFLI 391
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/46 (19%), Positives = 20/46 (43%)
Frame = -1
Query: 490 DTQSTTTKGSISDTECSCYFRREINVSR*VNQVDQETFLTLFTLVR 353
+T T ++ + YFRR++ +S ++ + T +R
Sbjct: 681 NTMENLTCATVKGSAVDMYFRRQVELSNMYRTMEANNYDTAEEAIR 726
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2
Query: 278 CITIKSTAISMFF 316
C T+K +A+ M+F
Sbjct: 688 CATVKGSAVDMYF 700
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +1
Query: 481 TVCLVCVYKPKQYCVRLLP 537
+V + C++ PK Y + + P
Sbjct: 891 SVTIACLFSPKLYIILIRP 909
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 636 QYAGTSGIVLQLQVG 592
+Y SG+V+QLQ G
Sbjct: 1549 EYGAVSGLVVQLQRG 1563
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,142
Number of Sequences: 438
Number of extensions: 3784
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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