Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP08_F_B01
(655 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 30 0.017
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 30 0.017
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 30 0.017
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 30 0.017
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 29 0.030
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 29 0.052
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 26 0.37
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 0.84
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 1.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.0
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 30.3 bits (65), Expect = 0.017
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = -1
Query: 364 SQKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNN 185
S+K S + N++K R ++ ++R R + R+ K + +LS +T +NN
Sbjct: 35 SRKRYSRSREREQNSYKNEREYRKYRETSKERS-RDRTERERSREPKIISSLSNNTIHNN 93
Query: 184 SYRFSH 167
+Y++++
Sbjct: 94 NYKYNY 99
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 LHDNTFKYTHHRRNIKK 284
+H+N +KY ++ N K
Sbjct: 90 IHNNNYKYNYNNNNYNK 106
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 30.3 bits (65), Expect = 0.017
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = -1
Query: 364 SQKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNN 185
S+K S + N++K R ++ ++R R + R+ K + +LS +T +NN
Sbjct: 35 SRKRYSRSREREQNSYKNEREYRKYRETSKERS-RDRTERERSREPKIISSLSNNTIHNN 93
Query: 184 SYRFSH 167
+Y++++
Sbjct: 94 NYKYNY 99
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 LHDNTFKYTHHRRNIKK 284
+H+N +KY ++ N K
Sbjct: 90 IHNNNYKYNYNNNNYNK 106
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 30.3 bits (65), Expect = 0.017
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = -1
Query: 364 SQKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNN 185
S+K S + N++K R ++ ++R R + R+ K + +LS +T +NN
Sbjct: 35 SRKRYSRSREREQNSYKNEREYRKYRETSKERS-RDRTERERSREPKIISSLSNNTIHNN 93
Query: 184 SYRFSH 167
+Y++++
Sbjct: 94 NYKYNY 99
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 LHDNTFKYTHHRRNIKK 284
+H+N +KY ++ N K
Sbjct: 90 IHNNNYKYNYNNNNYNK 106
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 30.3 bits (65), Expect = 0.017
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = -1
Query: 364 SQKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNN 185
S+K S + N++K R ++ ++R R + R+ K + +LS +T +NN
Sbjct: 35 SRKRYSRSREREQNSYKNEREYRKYRETSKERS-RDRTERERSREPKIISSLSNNTIHNN 93
Query: 184 SYRFSH 167
+Y++++
Sbjct: 94 NYKYNY 99
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 LHDNTFKYTHHRRNIKK 284
+H+N +KY ++ N K
Sbjct: 90 IHNNNYKYNYNNNNYNK 106
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.030
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = -1
Query: 364 SQKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNN 185
++K S + N++K R ++ ++R R + R+ K + +LS +T +NN
Sbjct: 34 NRKRNSRSREREQNSYKNEREYRKYRETSKERS-RDRTERERSREPKIISSLSNNTIHNN 92
Query: 184 SYRFSH 167
+Y++++
Sbjct: 93 NYKYNY 98
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 28.7 bits (61), Expect = 0.052
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = -1
Query: 364 SQKWQSTVGQLHDNTFKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNN 185
++K S + N++K R ++ ++R R + R+ K + +LS +T +NN
Sbjct: 34 NRKRNSRSREREQNSYKNEREYRKYRETSKERS-RDRAERERSREPKIISSLSNNTIHNN 92
Query: 184 SYRFSH 167
+Y++++
Sbjct: 93 NYKYNY 98
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.8 bits (54), Expect = 0.37
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = -1
Query: 316 KYTHHRRNIKKVEEDRLLRSKNCSRRNLIK--K*VCNLSGS---TSYNNSYRFSHFDI 158
K + R +K E RS+N + R K K + +LS + +YNN+Y+ H++I
Sbjct: 281 KLYKNEREYRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLHYNI 338
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 24.6 bits (51), Expect = 0.84
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 327 SWSWPTVLCHFWLGF 371
+WS+ T++C W+ F
Sbjct: 106 NWSFGTIMCDLWVSF 120
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 1.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 184 SCCNWCC 204
SCC WCC
Sbjct: 10 SCCCWCC 16
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/51 (21%), Positives = 22/51 (43%)
Frame = -1
Query: 319 FKYTHHRRNIKKVEEDRLLRSKNCSRRNLIKK*VCNLSGSTSYNNSYRFSH 167
++ T R+ + E +R K S N + + +YNN+Y ++
Sbjct: 59 YRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNNNYNTNY 109
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,589
Number of Sequences: 438
Number of extensions: 3156
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -