Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_K03
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    24   1.5  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   2.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   6.0  
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    22   6.0  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 93  RTLSSTISPXKALGESQRLLLAYGGQEFEDNRISSENWPEFKPKTPFGQ--MPVLEIDGK 266
           R + S++SP   L E+  L        F++  I  +   EF+ +T  G+    V  +DG 
Sbjct: 31  RKVGSSVSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEETVDGRKVKSVCTLDGN 90

Query: 267 QYAQ 278
           +  Q
Sbjct: 91  KLIQ 94


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/59 (22%), Positives = 25/59 (42%)
 Frame = +1

Query: 154 WLTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLRAPPSAGTSVASTGSPGP 330
           WL    S+     +    ++     +S+ C+C+    ++TLR   S G+ +A      P
Sbjct: 49  WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLRR-GSDGSQLAMRNDRSP 106


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/59 (22%), Positives = 25/59 (42%)
 Frame = +1

Query: 154 WLTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLRAPPSAGTSVASTGSPGP 330
           WL    S+     +    ++     +S+ C+C+    ++TLR   S G+ +A      P
Sbjct: 497 WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLRR-GSDGSQLAMRNDRSP 554


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 131 RREPEAAAGLRRP 169
           RREPEA  G  RP
Sbjct: 117 RREPEAEPGNNRP 129



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 131 RREPEAAAGLRRP 169
           RREPEA  G  RP
Sbjct: 143 RREPEAEPGNNRP 155


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 207 PEFKPKTPFGQMPVLEIDGK 266
           P  KP+TPF    +L ++ K
Sbjct: 8   PNRKPRTPFTTQQLLSLEKK 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,614
Number of Sequences: 438
Number of extensions: 2532
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)