Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_G08
         (389 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   5.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   5.0  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   5.0  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   8.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   8.7  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 308 ECVXPTGSCCLPDS 349
           +C    GSC  PDS
Sbjct: 47  DCFIDAGSCLTPDS 60


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 135 HHMQHLAVAAPYLGSSVS 82
           HH Q  AVAA   G++ S
Sbjct: 100 HHQQQQAVAAAAFGATSS 117


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 308 ECVXPTGSCCLPDS 349
           +C    GSC  PDS
Sbjct: 47  DCFIDAGSCLTPDS 60


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 38  GILVNDGCK*LF*GSLTEEPKYGAATARCCI 130
           G+   +GCK  F  ++ ++  Y     + CI
Sbjct: 123 GVYSCEGCKGFFKRTVRKDLSYACREEKSCI 153


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 38  GILVNDGCK*LF*GSLTEEPKYGAATARCCI 130
           G+   +GCK  F  ++ ++  Y     + CI
Sbjct: 123 GVYSCEGCKGFFKRTVRKDLSYACREEKSCI 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,801
Number of Sequences: 438
Number of extensions: 824
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)