Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_F20
(560 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 336 6e-95
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 330 7e-93
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 218 3e-59
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 185 2e-49
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 32 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.91
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.5
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.5
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 336 bits (827), Expect = 6e-95
Identities = 160/164 (97%), Positives = 160/164 (97%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGT 424
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV AGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 425 GEFEAGISXNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSE 556
GEFEAGIS NGQTREHALLAFTLGVKQLIV VNKMDSTEPPYSE
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 164
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 330 bits (810), Expect = 7e-93
Identities = 156/164 (95%), Positives = 158/164 (96%)
Frame = +2
Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGT 424
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV AG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 425 GEFEAGISXNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSE 556
GEFEAGIS NGQTREHALLAFTLGVKQLIV VNKMD T+PPYSE
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSE 164
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 218 bits (533), Expect = 3e-59
Identities = 104/107 (97%), Positives = 104/107 (97%)
Frame = +2
Query: 236 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVX 415
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 416 AGTGEFEAGISXNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSE 556
AGTGEFEAGIS NGQTREHALLAFTLGVKQLIV VNKMDSTEPPYSE
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 107
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 185 bits (451), Expect = 2e-49
Identities = 88/91 (96%), Positives = 88/91 (96%)
Frame = +2
Query: 284 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAGISXNGQT 463
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV AGTGEFEAGIS NGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 464 REHALLAFTLGVKQLIVXVNKMDSTEPPYSE 556
REHALLAFTLGVKQLIV VNKMDSTEPPYSE
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSE 91
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 32.3 bits (70), Expect = 0.003
Identities = 25/70 (35%), Positives = 32/70 (45%)
Frame = +2
Query: 323 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAGISXNGQTREHALLAFTLGVK 502
VT +D PGH FI G D VL+V A G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 503 QLIVXVNKMD 532
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
Score = 25.4 bits (53), Expect = 0.40
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 77 KTHINIVVIGHVDSGKST 130
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.91
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 86 INIVVIGHVDSGKST 130
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 308 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 409
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 308 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 409
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 167 DKRTIEKFEKEAQEMG 214
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 167 DKRTIEKFEKEAQEMG 214
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 167 DKRTIEKFEKEAQEMG 214
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,130
Number of Sequences: 438
Number of extensions: 2612
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -