Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_F16
         (544 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13 pro...   258   9e-69
L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13 pro...   258   9e-69
D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13 pro...   258   9e-69
BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13 p...   258   9e-69
BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13 p...   258   9e-69
BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13 p...   258   9e-69
BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13 p...   258   9e-69
BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13 p...   258   9e-69
L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13 pro...   194   2e-49

>X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13
           protein.
          Length = 151

 Score =  258 bits (632), Expect = 9e-69
 Identities = 129/156 (82%), Positives = 138/156 (88%), Gaps = 4/156 (2%)
 Frame = +1

Query: 67  MGRMHAPG*GY----LPXRRCLTAAVSXTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR 234
           MGRMHAPG G     LP RR +      TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LR
Sbjct: 1   MGRMHAPGKGLSQSALPYRRSVP-----TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILR 55

Query: 235 DSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 414
           DSHGVAQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRL
Sbjct: 56  DSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRL 115

Query: 415 ILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 522
           IL+ESRIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 116 ILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151


>L05090-1|AAC15854.1|  116|Homo sapiens ribosomal protein S13
           protein.
          Length = 116

 Score =  194 bits (473), Expect = 2e-49
 Identities = 92/104 (88%), Positives = 100/104 (96%)
 Frame = +1

Query: 139 TWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPD 318
           TWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILRI+K+ GLA D
Sbjct: 13  TWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLASD 72

Query: 319 LPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 450
           LPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 73  LPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,821,959
Number of Sequences: 237096
Number of extensions: 1443637
Number of successful extensions: 7705
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7689
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)