Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_F02
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 175 1e-43
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 175 1e-43
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 175 1e-43
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 175 1e-43
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 175 1e-43
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 175 1e-43
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 172 6e-43
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 175 bits (425), Expect = 1e-43
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 175 bits (425), Expect = 1e-43
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 175 bits (425), Expect = 1e-43
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 175 bits (425), Expect = 1e-43
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 175 bits (425), Expect = 1e-43
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 175 bits (425), Expect = 1e-43
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+KGKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 172 bits (419), Expect = 6e-43
Identities = 79/105 (75%), Positives = 94/105 (89%)
Frame = +2
Query: 149 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 463
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+K KY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKSKY 135
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,080,776
Number of Sequences: 237096
Number of extensions: 1553599
Number of successful extensions: 3990
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3990
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -