Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_D01
         (483 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65923-1|CAA46716.1|  133|Homo sapiens fau protein.                   132   6e-31
X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.                 132   6e-31
CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.                 132   6e-31
BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...   132   6e-31
AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...   132   6e-31
AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens ...   132   6e-31
X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.                  41   0.003

>X65923-1|CAA46716.1|  133|Homo sapiens fau protein.
          Length = 133

 Score =  132 bits (319), Expect = 6e-31
 Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
 Frame = +2

Query: 44  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 214
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 215 XXXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 394
                     +LGGKVHGSLARAGKV+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 395 QTFGRRRGPNSNS 433
            TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.
          Length = 133

 Score =  132 bits (319), Expect = 6e-31
 Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
 Frame = +2

Query: 44  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 214
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 215 XXXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 394
                     +LGGKVHGSLARAGKV+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 395 QTFGRRRGPNSNS 433
            TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.
          Length = 133

 Score =  132 bits (319), Expect = 6e-31
 Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
 Frame = +2

Query: 44  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 214
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 215 XXXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 394
                     +LGGKVHGSLARAGKV+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 395 QTFGRRRGPNSNS 433
            TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           protein.
          Length = 133

 Score =  132 bits (319), Expect = 6e-31
 Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
 Frame = +2

Query: 44  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 214
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 215 XXXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 394
                     +LGGKVHGSLARAGKV+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 395 QTFGRRRGPNSNS 433
            TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fo protein.
          Length = 133

 Score =  132 bits (319), Expect = 6e-31
 Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
 Frame = +2

Query: 44  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 214
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 215 XXXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 394
                     +LGGKVHGSLARAGKV+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 395 QTFGRRRGPNSNS 433
            TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22986 fis, clone KAT11742. ).
          Length = 133

 Score =  132 bits (319), Expect = 6e-31
 Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
 Frame = +2

Query: 44  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXX---X 214
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 215 XXXXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 394
                     +LGGKVHGSLARAGKV+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 395 QTFGRRRGPNSNS 433
            TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.
          Length = 230

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +2

Query: 356 RRIQYNRRFVNVVQTFGRRRG 418
           RR+QYNRRFVNVV TFG+++G
Sbjct: 1   RRMQYNRRFVNVVPTFGKKKG 21


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,750,030
Number of Sequences: 237096
Number of extensions: 1151053
Number of successful extensions: 6186
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6180
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)