Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP07_F_C04
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007439-1|AAH07439.1| 582|Homo sapiens DCP1 decapping enzyme h... 171 1e-42
AY146651-1|AAN62763.1| 582|Homo sapiens decapping enzyme hDcp1a... 171 1e-42
AK001969-1|BAA92008.1| 582|Homo sapiens protein ( Homo sapiens ... 171 1e-42
AJ275986-1|CAB77023.1| 582|Homo sapiens transcription factor pr... 171 1e-42
AB075507-1|BAE45754.1| 582|Homo sapiens putative protein produc... 164 3e-40
BC043437-1|AAH43437.1| 618|Homo sapiens DCP1 decapping enzyme h... 163 6e-40
AY146652-1|AAN62764.1| 618|Homo sapiens decapping enzyme hDcp1b... 163 6e-40
AK056200-1|BAB71118.1| 618|Homo sapiens protein ( Homo sapiens ... 163 6e-40
>BC007439-1|AAH07439.1| 582|Homo sapiens DCP1 decapping enzyme
homolog A (S. cerevisiae) protein.
Length = 582
Score = 171 bits (417), Expect = 1e-42
Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
+ M+ AALK+ DPY I D VALYTF + N+WEKT+IEG LFVY R+ PYH
Sbjct: 9 QEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFT 68
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVKE 435
I+NRLN +NL+EPV+K +E QL EPFLLYRNA IY IWFYDK++C R+A + +V+E
Sbjct: 69 IVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEE 128
Query: 436 SIKQSQGETMPQNSVYNSSTTST-QSIDIFSMLSKAQDDFNSNKGVTGNKSESTPAKAP 609
++SQ + S ++ S + IDI MLS+A+D++ N+ G+ + S+P P
Sbjct: 129 ETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQ--MGDSNISSPGLQP 185
>AY146651-1|AAN62763.1| 582|Homo sapiens decapping enzyme hDcp1a
protein.
Length = 582
Score = 171 bits (417), Expect = 1e-42
Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
+ M+ AALK+ DPY I D VALYTF + N+WEKT+IEG LFVY R+ PYH
Sbjct: 9 QEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFT 68
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVKE 435
I+NRLN +NL+EPV+K +E QL EPFLLYRNA IY IWFYDK++C R+A + +V+E
Sbjct: 69 IVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEE 128
Query: 436 SIKQSQGETMPQNSVYNSSTTST-QSIDIFSMLSKAQDDFNSNKGVTGNKSESTPAKAP 609
++SQ + S ++ S + IDI MLS+A+D++ N+ G+ + S+P P
Sbjct: 129 ETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQ--MGDSNISSPGLQP 185
>AK001969-1|BAA92008.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ11107 fis, clone PLACE1005803. ).
Length = 582
Score = 171 bits (417), Expect = 1e-42
Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
+ M+ AALK+ DPY I D VALYTF + N+WEKT+IEG LFVY R+ PYH
Sbjct: 9 QEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFT 68
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVKE 435
I+NRLN +NL+EPV+K +E QL EPFLLYRNA IY IWFYDK++C R+A + +V+E
Sbjct: 69 IVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEE 128
Query: 436 SIKQSQGETMPQNSVYNSSTTST-QSIDIFSMLSKAQDDFNSNKGVTGNKSESTPAKAP 609
++SQ + S ++ S + IDI MLS+A+D++ N+ G+ + S+P P
Sbjct: 129 ETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQ--MGDSNISSPGLQP 185
>AJ275986-1|CAB77023.1| 582|Homo sapiens transcription factor
protein.
Length = 582
Score = 171 bits (417), Expect = 1e-42
Identities = 85/179 (47%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
+ M+ AALK+ DPY I D VALYTF + N+WEKT+IEG LFVY R+ PYH
Sbjct: 9 QEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFT 68
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVKE 435
I+NRLN +NL+EPV+K +E QL EPFLLYRNA IY IWFYDK++C R+A + +V+E
Sbjct: 69 IVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEE 128
Query: 436 SIKQSQGETMPQNSVYNSSTTST-QSIDIFSMLSKAQDDFNSNKGVTGNKSESTPAKAP 609
++SQ + S ++ S + IDI MLS+A+D++ N+ G+ + S+P P
Sbjct: 129 ETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQ--MGDSNISSPGLQP 185
>AB075507-1|BAE45754.1| 582|Homo sapiens putative protein product
of Nbla00360 protein.
Length = 582
Score = 164 bits (398), Expect = 3e-40
Identities = 83/179 (46%), Positives = 115/179 (64%), Gaps = 3/179 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
+ M+ AALK+ PY I D VALYTF + N+WEKT+IEG LFVY R+ PYH
Sbjct: 9 QEMSLAALKQHVPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFT 68
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVKE 435
I+NRLN +NL+EPV+K +E QL EPFLLYRNA IY IWFYDK++ R+A + +V+E
Sbjct: 69 IVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDSHRIAKLMADVVEE 128
Query: 436 SIKQSQGETMPQNSVYNSSTTST-QSIDIFSMLSKAQDDFNSNKGVTGNKSESTPAKAP 609
++SQ + S ++ S + IDI MLS+A+D++ N+ G+ + S+P P
Sbjct: 129 ETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQ--MGDSNISSPGLQP 185
>BC043437-1|AAH43437.1| 618|Homo sapiens DCP1 decapping enzyme
homolog B (S. cerevisiae) protein.
Length = 618
Score = 163 bits (395), Expect = 6e-40
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
R ++ AAL+R DPY IVD A+ VALYTF NEWEKT++EG LFVY+R+ P H
Sbjct: 14 RDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFT 73
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVK- 432
IMNRL+ N EP++K ++ QL++PFLLYRNA+ IYGIWFYDK+EC R+A + L +
Sbjct: 74 IMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQY 133
Query: 433 ESIKQSQGETMPQNSVYNSSTTSTQSIDIFSMLSKAQDDFNSNK 564
E +K QG + V +S + +DI ML KA+D++ K
Sbjct: 134 EQLKAHQGTGAGISPVILNSGEG-KEVDILRMLIKAKDEYTKCK 176
>AY146652-1|AAN62764.1| 618|Homo sapiens decapping enzyme hDcp1b
protein.
Length = 618
Score = 163 bits (395), Expect = 6e-40
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
R ++ AAL+R DPY IVD A+ VALYTF NEWEKT++EG LFVY+R+ P H
Sbjct: 14 RDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFT 73
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVK- 432
IMNRL+ N EP++K ++ QL++PFLLYRNA+ IYGIWFYDK+EC R+A + L +
Sbjct: 74 IMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQY 133
Query: 433 ESIKQSQGETMPQNSVYNSSTTSTQSIDIFSMLSKAQDDFNSNK 564
E +K QG + V +S + +DI ML KA+D++ K
Sbjct: 134 EQLKAHQGTGAGISPVILNSGEG-KEVDILRMLIKAKDEYTKCK 176
>AK056200-1|BAB71118.1| 618|Homo sapiens protein ( Homo sapiens
cDNA FLJ31638 fis, clone NT2RI2003556. ).
Length = 618
Score = 163 bits (395), Expect = 6e-40
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 3/164 (1%)
Frame = +1
Query: 82 RSMNFAALKRADPYAREIVDSATHVALYTF--EENEWEKTNIEGALFVYSRNGEPYHSLV 255
R ++ AAL+R DPY IVD A+ VALYTF NEWEKT++EG LFVY+R+ P H
Sbjct: 14 RDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLFVYTRSASPKHGFT 73
Query: 256 IMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVK- 432
IMNRL+ N EP++K ++ QL++PFLLYRNA+ IYGIWFYDK+EC R+A + L +
Sbjct: 74 IMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAELMKNLTQY 133
Query: 433 ESIKQSQGETMPQNSVYNSSTTSTQSIDIFSMLSKAQDDFNSNK 564
E +K QG + V +S + +DI ML KA+D++ K
Sbjct: 134 EQLKAHQGTGAGISPVILNSGEG-KEVDILRMLIKAKDEYTKCK 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.128 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,484,241
Number of Sequences: 237096
Number of extensions: 1757177
Number of successful extensions: 3610
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3589
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -