Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP07_F_B07
         (649 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97055-2|CAI20388.1| 1501|Homo sapiens protein ( Human DNA seque...    35   0.22 
Z82201-1|CAI20274.1| 1501|Homo sapiens protein ( Human DNA seque...    35   0.22 
Y10776-1|CAA71749.1|  225|Homo sapiens CAP-binding protein compl...    35   0.22 
AL118498-1|CAI19709.1| 1501|Homo sapiens protein ( Human DNA seq...    35   0.22 
AL031843-1|CAI19936.1| 1501|Homo sapiens protein ( Human DNA seq...    35   0.22 
AL023801-1|CAI22791.1| 1501|Homo sapiens protein ( Human DNA seq...    35   0.22 
BC039315-1|AAH39315.1| 1349|Homo sapiens EF-hand calcium binding...    33   0.88 
AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    30   6.2  

>Z97055-2|CAI20388.1| 1501|Homo sapiens protein ( Human DNA sequence
           from clone RP3-388M5 on chromosome 22. ).
          Length = 1501

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 GHSNMYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKTSML 539
           G + M CC   R +E+ V E+ + N+   +    +ID+ KT ++
Sbjct: 149 GGNEMNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLV 192


>Z82201-1|CAI20274.1| 1501|Homo sapiens protein ( Human DNA sequence
           from clone RP3-345P10 on chromosome 22. ).
          Length = 1501

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 GHSNMYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKTSML 539
           G + M CC   R +E+ V E+ + N+   +    +ID+ KT ++
Sbjct: 149 GGNEMNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLV 192


>Y10776-1|CAA71749.1|  225|Homo sapiens CAP-binding protein complex
           interacting protein 1 protein.
          Length = 225

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 GHSNMYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKTSML 539
           G + M CC   R +E+ V E+ + N+   +    +ID+ KT ++
Sbjct: 68  GGNEMNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLV 111


>AL118498-1|CAI19709.1| 1501|Homo sapiens protein ( Human DNA
           sequence from clone RP1-185D5 on chromosome 22. ).
          Length = 1501

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 GHSNMYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKTSML 539
           G + M CC   R +E+ V E+ + N+   +    +ID+ KT ++
Sbjct: 149 GGNEMNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLV 192


>AL031843-1|CAI19936.1| 1501|Homo sapiens protein ( Human DNA
           sequence from clone RP1-246D7 on chromosome
           22q13.1-13.33.ontains GSSs.  ).
          Length = 1501

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 GHSNMYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKTSML 539
           G + M CC   R +E+ V E+ + N+   +    +ID+ KT ++
Sbjct: 149 GGNEMNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLV 192


>AL023801-1|CAI22791.1| 1501|Homo sapiens protein ( Human DNA
           sequence from clone RP4-786D3 on chromosome 22q13.31-33.
           ).
          Length = 1501

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 408 GHSNMYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKTSML 539
           G + M CC   R +E+ V E+ + N+   +    +ID+ KT ++
Sbjct: 149 GGNEMNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLV 192


>BC039315-1|AAH39315.1| 1349|Homo sapiens EF-hand calcium binding
           domain 6 protein.
          Length = 1349

 Score = 33.1 bits (72), Expect = 0.88
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 420 MYCCDNERYVELSVXERAYSNVCAAVSVVGMIDIRKTSML 539
           M CC   R +E+ V E+ + N+   +    +ID+ KT ++
Sbjct: 1   MNCCRTLRELEIQVGEKVFKNIKTVMKAFELIDVNKTGLV 40


>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = -3

Query: 548 HRY*HRCFSNIDHPY---YRYSCTHIRVCSLVYAQLHI-TFVVATVHITM-TKIFKYHFS 384
           H Y H+      + Y   Y Y C HI +C  +Y  ++  T++ A +H+ + T I+ Y ++
Sbjct: 46  HMYTHKHMYVYTYIYVYTYTYVCVHIHICVHIYLCMYTHTYMCAHIHMCVYTYIYVYIYT 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,076,454
Number of Sequences: 237096
Number of extensions: 1297838
Number of successful extensions: 2731
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)