Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_P11
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF195420-1|AAF28318.1|  442|Homo sapiens ODZ3 protein.                 30   5.0  

>AF195420-1|AAF28318.1|  442|Homo sapiens ODZ3 protein.
          Length = 442

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
 Frame = -3

Query: 235 TDTESDNKRSMLNRQGFTHRSQS------PQSNEKXETHPPVIRFYNCNEIF*NK*QNMA 74
           TDTE +NK    N Q  +++ QS      P   +    H P I   N N +   + Q+ A
Sbjct: 158 TDTEHENKSDSENEQPASNQGQSTLQPLPPSHKQHSAQHHPSITSLNRNSLTNRRNQSPA 217

Query: 73  PVSTFTINITIRREQCDSRRSFIV 2
           P +     +    E    + S+++
Sbjct: 218 PPAALPAELQTTPESVQLQDSWVL 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,923,795
Number of Sequences: 237096
Number of extensions: 1119450
Number of successful extensions: 2250
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2224
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)