Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_O08
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 63  IRKHDKMPTEEVLGPRKTMLILVIVVGCFAMLW 161
           +R H +     V    KT   L +VVG F   W
Sbjct: 287 VRSHQQSCINRVARETKTAGTLAVVVGGFVACW 319


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 40  CVRAGRKRYENTTKCRPRRCWVRGRQCS 123
           C    R+RY+   +C+P + +  GR  S
Sbjct: 409 CPGRVRRRYQPAFRCKPSQRFASGRYYS 436


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 53  DENDTKTRQNADRGGVGSAEDNAHTSDCC--GMFRYVVAQDPVSADLGPHT 199
           + N+     N +  G G++ +N +    C  G+  Y    DP   DL P T
Sbjct: 246 NNNNNNNGANDNGNGNGASNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPET 296


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 339 LQRAFRYVDGLLSCKPRLSVPVLPVQY-RTLPHSILPPGR 223
           LQ+ +R +DG      RL   VLP+     L HS   P +
Sbjct: 366 LQQTYRELDGEKQKTDRLLYSVLPISVANELRHSRPVPAK 405


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 339 LQRAFRYVDGLLSCKPRLSVPVLPVQY-RTLPHSILPPGR 223
           LQ+ +R +DG      RL   VLP+     L HS   P +
Sbjct: 366 LQQTYRELDGEKQKTDRLLYSVLPISVANELRHSRPVPAK 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,803
Number of Sequences: 438
Number of extensions: 4564
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)