Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_L13
         (555 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    25   0.39 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.4  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 312 LALQRHATRTHRFFVTLTITQLQLCVGFNPFNPVDTSRFILLALCKYVVH 163
           + L+RH +     +VTLTI  + + +      P  T R I+  L  +++H
Sbjct: 237 ILLRRHYSMNSTTYVTLTIVLMTMTLMTLWLEPSSTERMIIANL-NFILH 285


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -3

Query: 301 APRYSHSSFLCYTYYNSTTAVCRFQSFQPRRHIEIYTS 188
           A +Y      C    NST AVC      PRRH  +  S
Sbjct: 83  ASKYCGIGKECELSPNSTIAVCVCMRKCPRRHRPVCAS 120


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +2

Query: 284 VRVAWRWSASWQARDACCGGTTSKKMF 364
           + + W  + SW+A D  C      +MF
Sbjct: 94  LEIGWAITVSWKAGDVMCRIMAFFRMF 120


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 450 DRSARSTLLLNEGAGFIRTELKTL 379
           D   R T  LN+   F+R  L  L
Sbjct: 23  DTCGRDTYALNQSLHFVRASLSNL 46


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 450 DRSARSTLLLNEGAGFIRTELKTL 379
           D   R T  LN+   F+R  L  L
Sbjct: 113 DTCGRDTYALNQSLHFVRASLSNL 136


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 27  GCHFCKLW 4
           G H CKLW
Sbjct: 105 GIHLCKLW 112


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 27  GCHFCKLW 4
           G H CKLW
Sbjct: 105 GIHLCKLW 112


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 27  GCHFCKLW 4
           G H CKLW
Sbjct: 105 GIHLCKLW 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,101
Number of Sequences: 438
Number of extensions: 3564
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)