Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_I22
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   3.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 250 LRDYKRCCFRHTRVDRRFGYRVP 318
           LR  K C   HT V R  GY++P
Sbjct: 141 LRGLKSC---HTGVGRNVGYKIP 160


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 250 LRDYKRCCFRHTRVDRRFGYRVP 318
           LR  K C   HT V R  GY++P
Sbjct: 141 LRGLKSC---HTGVGRNVGYKIP 160


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 250 LRDYKRCCFRHTRVDRRFGYRVP 318
           LR  K C   HT V R  GY++P
Sbjct: 141 LRGLKSC---HTGVGRNVGYKIP 160


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 301 IADPLWCDESNNVYNRVADRENG 233
           ++D L C E +++++   D ENG
Sbjct: 71  LSDGLMCVEKDSIHSIDGDEENG 93


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 RNSKAIGVLWAIFTICYAIINVVAFVTP 286
           R ++ +GV+  +F +C+    ++  + P
Sbjct: 324 RAARTLGVIMGVFVVCWLPFFLMYVIVP 351


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 RNSKAIGVLWAIFTICYAIINVVAFVTP 286
           R ++ +GV+  +F +C+    ++  + P
Sbjct: 324 RAARTLGVIMGVFVVCWLPFFLMYVIVP 351


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 RNSKAIGVLWAIFTICYAIINVVAFVTP 286
           R ++ +GV+  +F +C+    ++  + P
Sbjct: 324 RAARTLGVIMGVFVVCWLPFFLMYVIVP 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,283
Number of Sequences: 438
Number of extensions: 3809
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)