Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_F20
(543 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 6.1
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 6.1
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 6.1
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 6.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 6.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 6.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 6.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 6.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 8.1
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.6
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLHYNINYIEQI 344
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 79 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 88 LTSPTAIVSFSVATFF*ITTRLGEKMS 8
L PT ++SF F + GEK++
Sbjct: 240 LILPTVLISFLCVLVFYLPAEAGEKVT 266
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 344
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 344
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 312 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 344
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/33 (21%), Positives = 17/33 (51%)
Frame = +1
Query: 94 PRVLNDLNQYLAEKSYVSGYTPSQADVQVFEQV 192
P++++ L+ +Y + Y P ++ EQ+
Sbjct: 301 PKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 333
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 381 TRTK*INVVVIVVFRCW 331
T T+ ++ VVI F CW
Sbjct: 257 TITRMLSAVVITFFICW 273
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.313 0.128 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,715
Number of Sequences: 438
Number of extensions: 2303
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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