Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_F03
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 100 2e-21
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 100 2e-21
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 100 2e-21
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 100 2e-21
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 100 2e-21
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 100 2e-21
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 100 4e-21
BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein. 33 0.38
BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein. 33 0.38
AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens ... 33 0.38
AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein. 33 0.38
AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein. 33 0.38
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 33 0.51
AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein. 30 2.7
BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclea... 29 4.7
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 29 4.7
AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens ... 29 4.7
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 100 bits (240), Expect = 2e-21
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAVKA
Sbjct: 109 RKERLYPLRKYAVKA 123
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 29 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVA 151
M K+K +LR K + LRVAKVTGG A
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAA 41
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 100 bits (240), Expect = 2e-21
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAVKA
Sbjct: 109 RKERLYPLRKYAVKA 123
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 29 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVA 151
M K+K +LR K + LRVAKVTGG A
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAA 41
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 100 bits (240), Expect = 2e-21
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAVKA
Sbjct: 109 RKERLYPLRKYAVKA 123
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 29 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVA 151
M K+K +LR K + LRVAKVTGG A
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAA 41
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 100 bits (240), Expect = 2e-21
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAVKA
Sbjct: 109 RKERLYPLRKYAVKA 123
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 29 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVA 151
M K+K +LR K + LRVAKVTGG A
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAA 41
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 100 bits (240), Expect = 2e-21
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAVKA
Sbjct: 109 RKERLYPLRKYAVKA 123
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 29 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVA 151
M K+K +LR K + LRVAKVTGG A
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAA 41
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 100 bits (240), Expect = 2e-21
Identities = 49/75 (65%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAVKA
Sbjct: 109 RKERLYPLRKYAVKA 123
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 29 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVA 151
M K+K +LR K + LRVAKVTGG A
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAA 41
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 99.5 bits (237), Expect = 4e-21
Identities = 48/75 (64%), Positives = 57/75 (76%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEI 353
VVRK+IARV V +Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+
Sbjct: 49 VVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQ 108
Query: 354 RKKSLFPPRVYAVKA 398
RK+ L+P R YAV+A
Sbjct: 109 RKERLYPLRKYAVRA 123
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 29 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVA 151
M K+K +LR K + LRVAKVTGG A
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAA 41
>BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 231 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 368
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein.
Length = 255
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 231 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 368
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ25376 fis, clone TST02010. ).
Length = 255
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 231 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 368
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 231 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 368
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein.
Length = 361
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 231 NLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 368
+++N +N KYKP+D + + K L AK+K RK + L
Sbjct: 5 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 50
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 32.7 bits (71), Expect = 0.51
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 174 VVRKAIARVYIVYHQKMKVNLRNHYK 251
VVRK+IARV V +Q K NLR YK
Sbjct: 48 VVRKSIARVLTVINQTQKENLRKFYK 73
>AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein.
Length = 1304
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 213 HQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSL 368
+QK+++ + +N+K K LD K+ + KAL KI TR + ++ L
Sbjct: 850 YQKIQLQRKLREENEKRKQLDAVIKRDQQKIKALNTDSLKISTRLNLLEQEL 901
>BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 222 MKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEA--KIKTRKEIRKKSL 368
M+ ++ +NK+ K L L+ ++ AM A KHE+ K R+++R+ S+
Sbjct: 69 MEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQVRENSI 119
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 222 MKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEA--KIKTRKEIRKKSL 368
M+ ++ +NK+ K L L+ ++ AM A KHE+ K R+++R+ S+
Sbjct: 69 MEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQVRENSI 119
>AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ11222 fis, clone PLACE1008177. ).
Length = 495
Score = 29.5 bits (63), Expect = 4.7
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 222 MKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEA--KIKTRKEIRKKSL 368
M+ ++ +NK+ K L L+ ++ AM A KHE+ K R+++R+ S+
Sbjct: 69 MEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQVRENSI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,418,590
Number of Sequences: 237096
Number of extensions: 679151
Number of successful extensions: 1550
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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