Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_D22
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   1.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   1.9  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.6  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   4.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.0  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   7.9  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = -2

Query: 609 YHSGPY---ETVEGLSHQCLQT*QQHQMAVTWLFRYHRHCLQTV*LSW 475
           Y++ PY    T    S QC  T  Q    ++WLF      L +V L W
Sbjct: 215 YYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLLPSVYLRW 262


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 217 IASMAYSTWNSL-PSGLNVLTPRSYSERV 134
           ++S  +  W  L  SG+   TPRS+S RV
Sbjct: 610 LSSAVWFAWGVLLNSGIGEGTPRSFSARV 638


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -1

Query: 280 FSTAKTTPSEVQMPIAVEPSLIASMAYSTWNSLPSGLN 167
           + T +T   +V+  +A   S I       WN +P G N
Sbjct: 41  YQTLQTHMKKVREQMAGILSRIPEQGVVNWNKIPEGAN 78


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 372  PSDPKRRKRCVDLLQQSFRWSW 307
            PS P    RC  L  QS + SW
Sbjct: 1111 PSIPPEDVRCAALTSQSLQVSW 1132


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 372  PSDPKRRKRCVDLLQQSFRWSW 307
            PS P    RC  L  QS + SW
Sbjct: 1107 PSIPPEDVRCAALTSQSLQVSW 1128


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 YTHTLIVHKPVVLTFNSGPFN*GPGVGHQTR 360
           YT++L   KPV+   + G F  G    H+ R
Sbjct: 10  YTNSLDQSKPVMFYVHEGAFISGTSSFHEMR 40


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 387 RSWSRPSDP 361
           RSWSRP +P
Sbjct: 166 RSWSRPREP 174


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 371 HQTRNGASDVSIYFNNLFDG 312
           H  +   + V + F NLFDG
Sbjct: 179 HAVKFNPAKVKLRFENLFDG 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,081
Number of Sequences: 438
Number of extensions: 4302
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)