Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_D18
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   1.5  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   2.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   2.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   2.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.0  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 83  FYYSLSLMVYNVVLWAPLL 139
           F++  S ++ NVV W+  L
Sbjct: 365 FFFPFSFLILNVVYWSTFL 383


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 125 TRPRCTPSGLTNNKSTLTLFRHHEI 51
           T+P C+P  LT + +T  L +  EI
Sbjct: 146 TQPMCSPKLLTFDLTTSQLLKQVEI 170


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 125 TRPRCTPSGLTNNKSTLTLFRHHEI 51
           T+P C+P  LT + +T  L +  EI
Sbjct: 146 TQPMCSPKLLTFDLTTSQLLKQVEI 170


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 125 TRPRCTPSGLTNNKSTLTLFRHHEI 51
           T+P C+P  LT + +T  L +  EI
Sbjct: 146 TQPMCSPKLLTFDLTTSQLLKQVEI 170


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +1

Query: 268  SSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRN 408
            S+  V  +   G  +V +G+Q  G      +QP T++  +  +  +N
Sbjct: 909  SNSQVQGVAVPGSGIVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQN 955


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 107 PSGLTNNKSTLTLFRHHEILLTCS 36
           P   + +K T T+  +H I L CS
Sbjct: 62  PLPYSGSKCTWTITSYHRINLKCS 85


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 70  NVSVLLLFVKPDGVQRGLVGTIIE 141
           NVS+L L   PD  +R  +G  IE
Sbjct: 460 NVSLLHLIFPPDIAKRLWLGETIE 483


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,345
Number of Sequences: 438
Number of extensions: 2589
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)