Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_D09
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome, ma... 90 7e-18
BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome, ma... 90 7e-18
AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPa... 90 7e-18
AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit ... 90 7e-18
AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit ... 86 1e-16
BC025249-1|AAH25249.1| 574|Homo sapiens zinc finger and BTB dom... 30 8.3
AK027045-1|BAB15636.1| 574|Homo sapiens protein ( Homo sapiens ... 30 8.3
>BC004430-1|AAH04430.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 89.8 bits (213), Expect = 7e-18
Identities = 45/90 (50%), Positives = 51/90 (56%)
Frame = +2
Query: 383 LXDFFLDLEAGIGIEVQLCKECIEWAKEERRTFLRQSLEARLIALYFDTGMYXXXXXXXX 562
L D FLD+EA G EV+LC ECIEWAK E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGS 151
Query: 563 XXXXXXXXXXXXXXXXXXXXXXSKTYHALS 652
SKTYHALS
Sbjct: 152 QLLRELKKMDDKALLVEVQLLESKTYHALS 181
Score = 56.0 bits (129), Expect = 1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 115 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXXXX 294
A + F+R++ ST+R+ + + +V ++ E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 295 XXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
RPFL+ ISKAKAA+LVRSL
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSL 92
>BC000437-1|AAH00437.1| 422|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 11 protein.
Length = 422
Score = 89.8 bits (213), Expect = 7e-18
Identities = 45/90 (50%), Positives = 51/90 (56%)
Frame = +2
Query: 383 LXDFFLDLEAGIGIEVQLCKECIEWAKEERRTFLRQSLEARLIALYFDTGMYXXXXXXXX 562
L D FLD+EA G EV+LC ECIEWAK E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGS 151
Query: 563 XXXXXXXXXXXXXXXXXXXXXXSKTYHALS 652
SKTYHALS
Sbjct: 152 QLLRELKKMDDKALLVEVQLLESKTYHALS 181
Score = 56.0 bits (129), Expect = 1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 115 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXXXX 294
A + F+R++ ST+R+ + + +V ++ E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 295 XXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
RPFL+ ISKAKAA+LVRSL
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSL 92
>AK223196-1|BAD96916.1| 423|Homo sapiens proteasome 26S non-ATPase
subunit 11 variant protein.
Length = 423
Score = 89.8 bits (213), Expect = 7e-18
Identities = 45/90 (50%), Positives = 51/90 (56%)
Frame = +2
Query: 383 LXDFFLDLEAGIGIEVQLCKECIEWAKEERRTFLRQSLEARLIALYFDTGMYXXXXXXXX 562
L D FLD+EA G EV+LC ECIEWAK E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGS 151
Query: 563 XXXXXXXXXXXXXXXXXXXXXXSKTYHALS 652
SKTYHALS
Sbjct: 152 QLLRELKKMDDKALLVEVQLLESKTYHALS 181
Score = 56.0 bits (129), Expect = 1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 115 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXXXX 294
A + F+R++ ST+R+ + + +V ++ E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 295 XXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
RPFL+ ISKAKAA+LVRSL
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSL 92
>AB003102-1|BAA19748.1| 422|Homo sapiens 26S proteasome subunit
p44.5 protein.
Length = 422
Score = 89.8 bits (213), Expect = 7e-18
Identities = 45/90 (50%), Positives = 51/90 (56%)
Frame = +2
Query: 383 LXDFFLDLEAGIGIEVQLCKECIEWAKEERRTFLRQSLEARLIALYFDTGMYXXXXXXXX 562
L D FLD+EA G EV+LC ECIEWAK E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGS 151
Query: 563 XXXXXXXXXXXXXXXXXXXXXXSKTYHALS 652
SKTYHALS
Sbjct: 152 QLLRELKKMDDKALLVEVQLLESKTYHALS 181
Score = 56.0 bits (129), Expect = 1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 115 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXXXX 294
A + F+R++ ST+R+ + + +V ++ E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 295 XXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
RPFL+ ISKAKAA+LVRSL
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSL 92
>AF001212-1|AAB58732.1| 422|Homo sapiens 26S proteasome subunit 9
protein.
Length = 422
Score = 85.8 bits (203), Expect = 1e-16
Identities = 44/90 (48%), Positives = 50/90 (55%)
Frame = +2
Query: 383 LXDFFLDLEAGIGIEVQLCKECIEWAKEERRTFLRQSLEARLIALYFDTGMYXXXXXXXX 562
L D FLD+EA G EV+LC E IEWAK E+RTFLRQ+LEARL++LYFDT Y
Sbjct: 92 LLDLFLDMEAATGQEVELCLESIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGS 151
Query: 563 XXXXXXXXXXXXXXXXXXXXXXSKTYHALS 652
SKTYHALS
Sbjct: 152 QLLRELKKMDDKALLVEVQLLESKTYHALS 181
Score = 56.0 bits (129), Expect = 1e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 115 AGAMLFERSRVSSSTNRDEDVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXXXX 294
A + F+R++ ST+R+ + + +V ++ E+DEE ++ KEQ IL
Sbjct: 4 AAVVEFQRAQSLLSTDREASIDILHSIVKR-DIQENDEEAVQVKEQSILELGSLLAKTGQ 62
Query: 295 XXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
RPFL+ ISKAKAA+LVRSL
Sbjct: 63 AAELGGLLKYVRPFLNSISKAKAARLVRSL 92
>BC025249-1|AAH25249.1| 574|Homo sapiens zinc finger and BTB domain
containing 3 protein.
Length = 574
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 196 PFCQSCGRLRLCSSMMRRVIFQITSLRPY-CVY-LYAYT 86
P C++CG+ CS +RR T RPY C Y L +YT
Sbjct: 472 PTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRSYT 510
>AK027045-1|BAB15636.1| 574|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23392 fis, clone HEP17418. ).
Length = 574
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 196 PFCQSCGRLRLCSSMMRRVIFQITSLRPY-CVY-LYAYT 86
P C++CG+ CS +RR T RPY C Y L +YT
Sbjct: 472 PTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRSYT 510
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,170,151
Number of Sequences: 237096
Number of extensions: 1942166
Number of successful extensions: 4665
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4660
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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