Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G21
         (651 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56360.1 68418.m07034 calmodulin-binding protein similar to a...   136   2e-32
At2g42390.1 68415.m05246 protein kinase C substrate, heavy chain...   107   8e-24
At1g72270.1 68414.m08355 expressed protein                             33   0.22 
At2g29310.1 68415.m03560 tropinone reductase, putative / tropine...    29   2.7  
At1g14220.1 68414.m01683 ribonuclease T2 family protein contains...    28   6.2  
At3g26120.1 68416.m03257 RNA-binding protein, putative similar t...    27   8.2  
At2g37630.1 68415.m04616 myb family transcription factor (MYB91)...    27   8.2  
At1g77210.1 68414.m08993 sugar transporter, putative similar to ...    27   8.2  

>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
           alpha glucosidase II beta subunit from GI:2104691 [Mus
           musculus]
          Length = 647

 Score =  136 bits (328), Expect = 2e-32
 Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
 Frame = +3

Query: 135 SYFVIFCSVIIFAQSDVPRP-RGVSLSKASLYLPTKDFTCFDGTATIPFSYVNDDYCDCF 311
           S+ ++  S I  + S    P  G+S      Y  + +  C DG+     + +NDD+CDC 
Sbjct: 17  SFLLLLASAIRSSSSPPNDPFLGISPQDEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDCS 76

Query: 312 DGSDEPGTSACINGVFHCTNAGHRPQNLPSSXVNDGVCDCCDGTDEYANPTACTNICEEL 491
           DG+DEPGTSAC  G F+C NAGH P  L SS VNDG+CDCCDG+DEY    +C N C E 
Sbjct: 77  DGTDEPGTSACPTGKFYCRNAGHSPVILFSSRVNDGICDCCDGSDEYDGHVSCQNTCWEA 136

Query: 492 GKEARAEAQRVAELHKAGSQLXIDLIQKGNXKRNEMAEQLTQLEKDK 632
           GK AR   ++  E +  G  +    I++      + A +L +L+ ++
Sbjct: 137 GKAARENLKKKIETYNQGLVIRRQEIEQAKVGLEKDAAELKKLKSEQ 183


>At2g42390.1 68415.m05246 protein kinase C substrate, heavy
           chain-related similar to Protein kinase C substrate, 80
           kDa protein, heavy chain (PKCSH) (80K-H protein)
           (Swiss-Prot:P14314) [Homo sapiens]; contains 1
           transmembrane domain;
          Length = 212

 Score =  107 bits (256), Expect = 8e-24
 Identities = 43/86 (50%), Positives = 56/86 (65%)
 Frame = +3

Query: 225 YLPTKDFTCFDGTATIPFSYVNDDYCDCFDGSDEPGTSACINGVFHCTNAGHRPQNLPSS 404
           Y  +    C DG+ +     +ND++CDC DG+DEPGTSAC NG F+C N G  P+ + SS
Sbjct: 35  YFDSDVIKCKDGSKSFTRDRLNDNFCDCLDGTDEPGTSACPNGKFYCRNIGSSPKFVYSS 94

Query: 405 XVNDGVCDCCDGTDEYANPTACTNIC 482
            VND +CDCCDG+DEY +   C N C
Sbjct: 95  RVNDRICDCCDGSDEYESSIHCPNTC 120


>At1g72270.1 68414.m08355 expressed protein
          Length = 2777

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = -2

Query: 554  QLAACFMQLCYSLSFCSGFFSELFTNVSTGRRISVFICSITAITDSVINXGTRQILR--P 381
            ++A   ++ C  LS+CS FFS + T   TG   S F+  +  ITD++ +    +  +   
Sbjct: 2338 KMARHLVENCGLLSWCSSFFS-MLTTKPTGDEDSRFVVVLEVITDALASRNDTEWSQRSA 2396

Query: 380  VSGICTMENTVYT 342
            + G+  + + +YT
Sbjct: 2397 LEGLMEISSRLYT 2409


>At2g29310.1 68415.m03560 tropinone reductase, putative / tropine
           dehydrogenase, putative similar to tropinone reductase
           SP:P50165 from [Datura stramonium]
          Length = 262

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -2

Query: 575 FLYEVYXQL--AACFMQLCYSLSFCSGFFSELFTNVSTGRRISVFICSITAITDSVINXG 402
           F Y +   L  A  F QL + L   SGF S +F + +TG  +SV   SI ++T   +N  
Sbjct: 111 FSYHISTNLEPAFHFSQLSHLLLKASGFGSIVFMSSATG-VVSVQCGSIYSLTKGALNQL 169

Query: 401 TRQI 390
           TR +
Sbjct: 170 TRNL 173


>At1g14220.1 68414.m01683 ribonuclease T2 family protein contains
           similarity to S-like ribonuclease PD1 GI:9957752 from
           [Prunus dulcis]; contains ribonuclease T2 family
           histidine protein motif
          Length = 228

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +3

Query: 231 PTKDFTCFDGTATIPFSYVNDDYCDCFDGSDEPGTSACINGVFHCTNAGHRPQN 392
           P +DF  F      P +Y +     C+  S +P     I+G++   N G  P N
Sbjct: 24  PQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWPNYNGGSWPSN 77


>At3g26120.1 68416.m03257 RNA-binding protein, putative similar to
           GB:AAC39463 from [Zea mays], PF00076 RNA recognition
           motif (2 copies)
          Length = 615

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 139 IS*YFVPSSYLPSPMCLDPAVYLCLKHL-SIYRQKILLVLME 261
           +S + +    +  P C DP   L +K++ + Y QK+LL +++
Sbjct: 388 LSQFLISEETMEDPSCRDPRTTLMIKNIPNKYSQKLLLDMLD 429


>At2g37630.1 68415.m04616 myb family transcription factor (MYB91)
           contains Pfam profile: PF00249 myb-like DNA-binding
           domain
          Length = 367

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 21/89 (23%), Positives = 33/89 (37%)
 Frame = +3

Query: 381 RPQNLPSSXVNDGVCDCCDGTDEYANPTACTNICEELGKEARAEAQRVAELHKAGSQLXI 560
           R +N P   V   +   C G+ E    +     C EL +  RA A    E      +L +
Sbjct: 225 RAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEAAWRLRRLEL 284

Query: 561 DLIQKGNXKRNEMAEQLTQLEKDKSEAXK 647
            L  +   ++ E  E++    K   E  K
Sbjct: 285 QLESEKTCRQREKMEEIEAKMKALREEQK 313


>At1g77210.1 68414.m08993 sugar transporter, putative similar to
           monosaccharide transporter PaMst-1 [Picea abies]
           GI:2258137, sugar carrier protein GI:169735 from
           [Ricinus communis], glucose transporter [Saccharum
           hybrid cultivar H65-7052] GI:347855; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 504

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = -2

Query: 554 QLAACFMQLCYSLSFCSGFFSELFTNVSTGRRISVFICSITAITDSVINXGTRQILRPVS 375
           Q+   F    Y     S F +   T +  GRR S+ + S++     VIN   + IL  + 
Sbjct: 83  QILTLFTSSLYFAGLISTFGASYVTRIY-GRRGSILVGSVSFFLGGVINAAAKNILMLIL 141

Query: 374 G 372
           G
Sbjct: 142 G 142


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,664,761
Number of Sequences: 28952
Number of extensions: 233215
Number of successful extensions: 619
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)