Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G16
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   1.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.4  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   4.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.8  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   7.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 152 EDVFGHDICSKFYTALH 102
           +D   H++C K+Y  +H
Sbjct: 480 QDFMPHELCDKYYRCVH 496


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 62  LKSCLSRPEFNKQHGEPYKIWNKYHDQKRLQP 157
           ++ C+   +    HG   KI N+Y +   ++P
Sbjct: 71  IRPCVISRQLRVSHGCVSKILNRYQETGSIRP 102


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 329 LRVKGPVRMPT 361
           +RVK P+RMPT
Sbjct: 1   MRVKHPLRMPT 11


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 329 LRVKGPVRMPT 361
           +RVK P+RMPT
Sbjct: 1   MRVKHPLRMPT 11


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = -1

Query: 245 CGG*GRPLPGVSRCLCLTLQRLPLFTITSL 156
           C G  RP      C+C     +PL  I  +
Sbjct: 553 CNGDNRPADCQQNCMCTHKVDIPLNAIVEI 582


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 5/20 (25%), Positives = 15/20 (75%)
 Frame = +2

Query: 200 KDIEKPQAEVSPIHRIRITL 259
           +++EK + ++S +H+  +T+
Sbjct: 92  REVEKAKRDLSSVHKTTLTI 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,538
Number of Sequences: 336
Number of extensions: 3136
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)