Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G08
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 3e-28
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 62 5e-10
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 57 1e-08
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 50 2e-06
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 1e-04
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 43 2e-04
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 43 2e-04
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 43 2e-04
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 41 8e-04
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 41 8e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 39 0.003
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.012
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.028
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.050
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.066
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.26
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.35
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 32 0.46
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.1
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 31 1.1
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 30 1.4
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.4
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 1.9
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.9
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.9
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.5
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.3
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.3
SB_18153| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=5) 29 4.3
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 28 5.7
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 122 bits (294), Expect = 3e-28
Identities = 67/130 (51%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
Frame = +1
Query: 259 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 435
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 436 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAAGA 615
LSFWRGN AN IRYFPTQALNFAFKD+ K +F + + S+ + GGAAGA
Sbjct: 69 FLSFWRGNLANCIRYFPTQALNFAFKDQVKALFKPK---KTDSNAIKFSKNIASGGAAGA 125
Query: 616 TSLCFVYPLD 645
SL FVY LD
Sbjct: 126 MSLFFVYSLD 135
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/99 (19%), Positives = 45/99 (45%)
Frame = +1
Query: 244 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP 423
++ + F+K+ +GG + A+S V ++ + L + ++++ G++D + +
Sbjct: 108 SNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTI 167
Query: 424 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 540
GL+ +RG + + + F D K + LG
Sbjct: 168 ASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPILLG 206
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 385 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 537
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/88 (45%), Positives = 63/88 (71%)
Frame = +1
Query: 265 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 444
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 445 FWRGNFANVIRYFPTQALNFAFKDKYKQ 528
+++GN NVIR FP A+ FA ++YK+
Sbjct: 90 YFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/122 (38%), Positives = 68/122 (55%)
Frame = +1
Query: 280 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 459
GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 460 FANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAAGATSLCFVYP 639
ANVI+ P + F +K K++ V + ++ GVT ++ G AG S +YP
Sbjct: 197 GANVIKIAPESGIKFFAYEKAKKL----VGSDTKALGVTDRLL--AGSMAGVASQTSIYP 250
Query: 640 LD 645
L+
Sbjct: 251 LE 252
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/123 (26%), Positives = 60/123 (48%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 453
LAG ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 454 GNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAAGATSLCFV 633
G F +++ P ++ A + K +L + GV LV+ G A+
Sbjct: 288 GLFPSLLGIIPYAGIDLAVYETLKNFYLNYHKNQSADPGV--LVLLACGTASSTCGQLAS 345
Query: 634 YPL 642
YPL
Sbjct: 346 YPL 348
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 232 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 408
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 409 FVRIPKEQGLLSFWR 453
+R + +G+ SFWR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +1
Query: 253 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 432
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 433 GLLSFWRGNFANVIRYFPTQALNFA 507
G+ +FW+GN + IR FP A+ +A
Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 50.8 bits (116), Expect = 9e-07
Identities = 37/124 (29%), Positives = 59/124 (47%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 453
LAG S ++ V P E +K L VQHV+K ++ YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGILALYK 213
Query: 454 GNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAAGATSLCFV 633
G + + FP FA L +V + R T + ++ G AGA +
Sbjct: 214 GVTPSFLGLFP-----FAGGSFLAYQILDKVDSTRTEPSATPICMFVNGCVAGAFAHTLS 268
Query: 634 YPLD 645
+P D
Sbjct: 269 HPFD 272
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/123 (27%), Positives = 59/123 (47%)
Frame = +1
Query: 277 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 456
AG ++ +AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQG 97
Query: 457 NFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAAGATSLCFVY 636
N +R P A+ F + F +R GV + ++ GG AG S +
Sbjct: 98 NTVTAVRDIPGFAVYFGVYELLCDWFSNLFGSR----GVATYLM--AGGFAGVVSWASTF 151
Query: 637 PLD 645
P D
Sbjct: 152 PFD 154
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/90 (31%), Positives = 45/90 (50%)
Frame = +1
Query: 235 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 414
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 415 RIPKEQGLLSFWRGNFANVIRYFPTQALNF 504
+ KE+G++ F RG + ++R F Q L F
Sbjct: 180 QSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +1
Query: 286 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 465
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 466 NVIRYFPTQALNFAFKDKYKQVF 534
++ P +A+ D + +F
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +1
Query: 397 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVT 576
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V + S +
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVL------QTSSPAIN 66
Query: 577 SLVIWPPGGAAGATSLCFVYPLD 645
LV G AG T+ YPLD
Sbjct: 67 KLV---AGSLAGMTACACTYPLD 86
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 271 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LSF 447
F+ GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRGL 232
Query: 448 WRGNFANVIRYFPTQALNFAFKDKYKQVFLGR 543
+RG N +R P A+ F + KQ FL R
Sbjct: 233 YRGLSINYLRVCPQVAIMFGVYEVTKQ-FLNR 263
Score = 33.9 bits (74), Expect = 0.11
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP-KEQGLLSFW 450
+AG ++ + P++ V+ ++ Q+A DQ Y I I KE G + +
Sbjct: 69 VAGSLAGMTACACTYPLDMVR-----SRLAFQVAQDQGYTTITQTIRCISVKEGGPKALY 123
Query: 451 RGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVT---SLVI---WPPGGAAG 612
+G ++ P + F + K FL + ++ T L I + GG AG
Sbjct: 124 KGFVPTLLTIVPAMGIGFYMFETMKAYFLETRIAFTNTNPDTLCPELSIIGGFVCGGVAG 183
Query: 613 ATSLCFVYPLD 645
A S YPLD
Sbjct: 184 AVSQTIAYPLD 194
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Frame = +1
Query: 247 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGI 399
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 400 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 534
+ V + K +G+ + ++G + R ++ D+ K ++
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI-PKEQGLLSFW 450
+AGG++ + + P++ V+ ++ Q+A + Y GI +I E G+++ +
Sbjct: 3 VAGGLAGLTACSCTYPLDIVR-----SRLAFQVADEHTYCGICQTVKQIFMTEGGMVALY 57
Query: 451 RGNFANVIRYFPTQALNFAFKDKYKQVFLGR--VLTR-RRSSGVTSLVIWPPGGA----- 606
RG + P + F + +K F+ VLTR +G T V+ PGG
Sbjct: 58 RGFTPTSLSMIPAVGIGFYAFESFKDFFVAMKGVLTRIHPETGET--VLTAPGGLLCGAL 115
Query: 607 AGATSLCFVYPLD 645
AGATS YPLD
Sbjct: 116 AGATSQTLAYPLD 128
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 229 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 399
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 400 VDAFVRIPKEQGLLSFWRG 456
D F I KE+G + ++G
Sbjct: 79 KDCFRTILKEEGAMGLFKG 97
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 271 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 450
F +GGI+ +S P++ VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 451 RGNFANVIRYFPTQA 495
+G A ++R FPT A
Sbjct: 421 QGLLATILRGFPTNA 435
Score = 33.5 bits (73), Expect = 0.15
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 10/134 (7%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA----------ADQRYKGIVDAFVRIP 423
++G I+ V P+E K +QVQ +++ Y G +D ++
Sbjct: 249 ISGAIAGGVQSIVCCPMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVF 308
Query: 424 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGG 603
+GL +RG R P AL F ++ V ++ + ++ GG
Sbjct: 309 HSEGLRGCFRGMAITTTRDIPAFALYFG---SFQYVCELLTPKGEHVDNLSPIRLFFSGG 365
Query: 604 AAGATSLCFVYPLD 645
AG S YP+D
Sbjct: 366 IAGTLSWILTYPVD 379
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/81 (25%), Positives = 43/81 (53%)
Frame = +1
Query: 262 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 441
A++ +AG +S + A P++ +K+ LQ + K +KG +D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 442 SFWRGNFANVIRYFPTQALNF 504
++G + ++ P+ AL F
Sbjct: 80 GLYKGMLSPLLMATPSTALTF 100
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 453
L G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482
Query: 454 G 456
G
Sbjct: 483 G 483
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 385 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 528
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/125 (28%), Positives = 59/125 (47%)
Frame = +1
Query: 271 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 450
F++G + V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 451 RGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAAGATSLCF 630
+G +++ P + + D K L +SG T LV G AG +
Sbjct: 90 KGLVPSLVSIAPFLGVQQSVYDIMKLRALDSAFA--ANSG-TFLVC---GAIAGMIAQTV 143
Query: 631 VYPLD 645
V+PLD
Sbjct: 144 VHPLD 148
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +1
Query: 271 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 450
F A IS + A P++ K +Q + I YKG +D RI + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 451 RGNFANVIRYFPTQALNFAFKDK 519
+G R P L F F ++
Sbjct: 154 KGFTPYYFRIGPHTVLTFIFLEQ 176
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 388 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 537
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 370 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 534
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.1 bits (87), Expect = 0.003
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +1
Query: 265 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 444
+ FLAGG ++ V +T P++ + L +Q Q + KG + G
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGG 163
Query: 445 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGA-AGATS 621
F++G FA+++ Y P+ A+ +A Y V +G + + G L++ G AG T+
Sbjct: 164 FYKGYFASLMTYAPSSAIWWASYGFYTGV-IGNL----SADGTHRLLVLGSSGVLAGVTA 218
Query: 622 LCFVYPLD 645
PLD
Sbjct: 219 ATLTNPLD 226
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 274 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 450
+ G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 451 RGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTR 555
G V R D K + L L R
Sbjct: 174 TGMKPTVKRAACISGTQIPTYDHTKHLLLNAELMR 208
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 274 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 450
LA + A T VA P++ V+ Q + Y+G +D + + +G+L+ +
Sbjct: 215 LASALVAGFVATCVASPVDIVRTRFMTQPKDTK-GRPLVYQGTLDCIYKTVRHEGILALY 273
Query: 451 RGNFANVIR 477
+G F N R
Sbjct: 274 KGFFPNWTR 282
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 265 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 444
K LAGGI+ + P E VK LQ+ + AA Y+G +D + K G+L
Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97
Query: 445 FWRGNFANVIRYFPTQALNFA 507
+RG + + P ++ FA
Sbjct: 98 LYRGLSSLLYGSVPKASVRFA 118
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/97 (25%), Positives = 44/97 (45%)
Frame = +1
Query: 196 IFT*LKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA 375
+F+ + S K+ DP + AG I+ + + P++RVK +LQ++ +
Sbjct: 117 LFSCVSFVKSYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAF 171
Query: 376 ADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 486
Y G VD RI +E G+ ++G +R P
Sbjct: 172 GGSSYGGPVDCLRRIYREAGVRGVYKGISVTAMRDIP 208
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = +1
Query: 265 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 444
K+ +AG + A + P++ +K+ LQ + K YK D F +I + +G+
Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98
Query: 445 FWRGNFANVIRYFPTQALNFA 507
+RG ++ P + F+
Sbjct: 99 LFRGVTVPILNSIPNTTVLFS 119
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 316 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 456
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 400 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 525
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 418 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSL 582
+P+E L W G F++VI F A+N AF+++YK++ R++ R+ TS+
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKIL--RIICAGRNMERTSI 324
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 35.1 bits (77), Expect = 0.050
Identities = 27/109 (24%), Positives = 44/109 (40%)
Frame = +1
Query: 319 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 498
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 499 NFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAAGATSLCFVYPLD 645
F F + K + T + V+ L + G G YP D
Sbjct: 281 FFGFYEFTKNLLTPEGGT---VNDVSPLGLLTSGAMGGFFYWFLTYPTD 326
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 34.7 bits (76), Expect = 0.066
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 277 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 456
AG ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 457 NFANVIRYFP 486
+I P
Sbjct: 268 AVPRMIVIAP 277
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 418 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSG 570
+P+E +L W G ++VI F A+N F+D+YK ++L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYK-----KLLRRMRRSG 184
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 453
LAG + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
Query: 454 GNFANVIRYFPTQALNF 504
+ P Q L+F
Sbjct: 54 SYTTQLSMNIPFQTLHF 70
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 277 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 453
AG +A + P E +K LQ QH + I+ K G++D ++I + G +R
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 454 GNFANVIRYFP 486
G A R P
Sbjct: 172 GMTATWAREVP 182
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +1
Query: 274 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 453
LA GIS ++ + P E + L+ Q + Q+Y+ + +E+G +
Sbjct: 936 LAAGISKCIATSLCYPHEVARTRLRQQE--SEFLGRQKYRSFFQTLGTVLREEGWRGLYG 993
Query: 454 GNFANVIRYFPTQALNF 504
G +VIR P A+ F
Sbjct: 994 GLGTHVIRQVPNTAIMF 1010
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 283 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 453
G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 301 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 459
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 265 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLL 441
K+F+ G +A+ + P+E VK +Q+Q + + Y+ + A I K +G+L
Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65
Query: 442 SFWRGNFANVI 474
+ +G F +I
Sbjct: 66 AMQKGLFPALI 76
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 440
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 440
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 418 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLT-RRRSSGV 573
+P+E L + G ++VI F A+N F+++YK+VF R+ T R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF--RIATFRGRNSAV 313
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 440
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 440
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 277 AGGISAAVSKTAVAPIERVKLLLQ 348
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 394 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 531
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +1
Query: 265 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 444
K+F AGG P++ +K+ LQ K + G D ++ + +G
Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86
Query: 445 FWRGNFANVIRYFPTQALNF 504
++G A + P A+ F
Sbjct: 87 LYKGMAAPITGVTPIFAICF 106
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +1
Query: 244 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP 423
ADP + + AG + + +AP ER+K LLQ+ + K A + IV + V +
Sbjct: 122 ADPT-YLQIMNAGAFAGVCTTAIMAPGERIKCLLQILALQK---AKTEFPNIVLSIVYVD 177
Query: 424 KEQGLLSFWRGNFANVIRYFPTQALNFA 507
+ +S + RY + LN+A
Sbjct: 178 VDLSKISDFSVMLPFATRYILSH-LNYA 204
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 418 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTR 555
+P+E +L + G ++VI F A+N FK++YK++ R R
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGR 312
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 339 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 440
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_18153| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=5)
Length = 237
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/109 (20%), Positives = 48/109 (44%)
Frame = +1
Query: 208 LKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR 387
LK S + ++A V+ + + + +K+A +K+L + + Q+ +
Sbjct: 10 LKFEISESIKDVAKQVSNLSNKVTSEFKSVKNKSASTAETILKILGDLGEIKDQLLKTE- 68
Query: 388 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 534
+ + D+ R K G+ + R N ++ ++Y PT N + K +F
Sbjct: 69 -ETVADS-TRYKKSGGIAVYIRENISSGVKYIPTDNENVLWVKVCKNIF 115
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 421 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 537
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 557 LLVNTRPRNTCLYLSLKAKLSAWVGKYLMTLAKLPRQNERR 435
++ NTR + ++ + KLS +Y++ K PR+ E+R
Sbjct: 48 VVTNTREEDRAIFYQMVEKLSDREPRYILYDMKFPRKEEKR 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,982,647
Number of Sequences: 59808
Number of extensions: 374165
Number of successful extensions: 1243
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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