Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_F22
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g06360.1 68418.m00712 ribosomal protein S8e family protein co... 234 4e-62
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 31 0.51
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti... 30 1.2
At3g59140.1 68416.m06593 ABC transporter family protein putative... 30 1.2
At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and gb... 30 1.2
At4g35870.1 68417.m05094 expressed protein 29 2.7
At3g28770.1 68416.m03591 expressed protein 29 2.7
At2g42610.2 68415.m05274 expressed protein contains Pfam profile... 29 2.7
At2g42610.1 68415.m05273 expressed protein contains Pfam profile... 29 2.7
At1g65710.1 68414.m07458 expressed protein ; expression supporte... 29 2.7
At2g41460.1 68415.m05122 apurinic endonuclease-redox protein / D... 29 3.6
At1g76890.2 68414.m08948 trihelix DNA-binding protein / GT-2 fac... 29 3.6
At1g76890.1 68414.m08947 trihelix DNA-binding protein / GT-2 fac... 29 3.6
At5g25410.1 68418.m03014 expressed protein contains Pfam profil... 28 4.7
At2g22795.1 68415.m02704 expressed protein 28 4.7
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 28 6.2
At2g40950.1 68415.m05056 bZIP transcription factor family protei... 28 6.2
At4g36540.2 68417.m05189 basic helix-loop-helix (bHLH) family pr... 27 8.2
At4g36540.1 68417.m05188 basic helix-loop-helix (bHLH) family pr... 27 8.2
At3g09850.1 68416.m01175 D111/G-patch domain-containing protein ... 27 8.2
At1g76220.1 68414.m08851 hypothetical protein contains Pfam prof... 27 8.2
At1g49610.1 68414.m05562 F-box family protein contains F-box dom... 27 8.2
>At5g06360.1 68418.m00712 ribosomal protein S8e family protein
contains Pfam profile PF01201: Ribosomal protein S8e
Length = 260
Score = 234 bits (572), Expect = 4e-62
Identities = 115/200 (57%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Frame = +1
Query: 55 MPQNEYIERHQKLYGRRLDYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQ 234
MPQ +YI+ H+K G RLD+ GIK K+ K+ EK
Sbjct: 1 MPQGDYIDLHRKRNGYRLDHFERKRKKEAREVHKHSTMAQKSLGIKGKMIAKKNYAEKAL 60
Query: 235 MKKKIKAHEEKNVKQNT-EKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP 411
MKK +K HEE + ++ E V EGA+P YLLDR+ +RAKVLSN IKQKRKEKAGKW+VP
Sbjct: 61 MKKTLKMHEESSSRRKADENVQEGAVPAYLLDREDTTRAKVLSNTIKQKRKEKAGKWEVP 120
Query: 412 IPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKK 591
+PKVR A+ E+F+V++SGK K K WKRMVTK TFVG FTRKPPK+ERFIRP LRF K
Sbjct: 121 LPKVRPVAEDEMFRVIRSGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTK 180
Query: 592 AHVTHPELKATFCLPIIGVK 651
AHVTHPELK TFCL IIG+K
Sbjct: 181 AHVTHPELKCTFCLEIIGIK 200
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 349 KVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSG 468
+VL + ++ K KE+ W+ +P ++++ D EV KVLK G
Sbjct: 386 RVLGSFMRGKGKEE---WEFSLPTLKSRLDGEVEKVLKVG 422
>At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein contains Pfam profile
PF02493: MORN repeat
Length = 871
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 232 QMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKE 387
++KKK + E+K TE+ + +PVY ++ V ++ K+ N ++K K+
Sbjct: 632 ELKKKEQEEEKKTEMGLTEEDEDVLVPVYKEEKVVTAKEKIQENKQEEKYKD 683
>At3g59140.1 68416.m06593 ABC transporter family protein putative
multi resistance protein mrp - Arabidopsis thaliana,
EMBL:ATMRPPROT
Length = 1453
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 IKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVL--SNMIKQKRKEK 390
+ AH E + V PV ++R + S++KVL S +IKQ+ +EK
Sbjct: 823 VNAHRETAGSERVVAVENPTKPVKEINRVISSQSKVLKPSRLIKQEEREK 872
>At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and
gb|AA595092 come from this gene
Length = 234
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Frame = +1
Query: 205 NKERRNEKIQMKKKIKAHEEKNVK---QNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQ 375
+++ R ++ Q ++ + + K VK + EK AE A R + K L +K+
Sbjct: 27 DRQTREKEEQYWREAEGPKSKAVKKREEEAEKKAETAAKKLEAKRLAEQEEKELEKALKK 86
Query: 376 KRKEKAGKWDVPIPKV------RAQADAEVFKVLKSGKSKRK 483
K KA + VP+PKV R + + +V K+ SK+K
Sbjct: 87 PDK-KANRVTVPVPKVTEAELIRRREEDQVALAKKAEDSKKK 127
>At4g35870.1 68417.m05094 expressed protein
Length = 817
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/101 (21%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +1
Query: 220 NEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGK 399
+EK++ ++++A E + E A+GA +++ +DV + K + + + +R + GK
Sbjct: 312 DEKLRKLQELRADLESQLAAYKEGRAQGAGVAFVMFKDVYTANKAVQD-FRNERSRRTGK 370
Query: 400 WDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRM-VTKVTFV 519
+ + ++R Q + +KV ++ + W + +TKV +
Sbjct: 371 F-FSVTELRLQRNQ--WKVDRAPLATDIYWNHLGLTKVALI 408
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 190 KAKIFNKERRNEKIQMKKK---IKAHEEKNVKQNTE 288
K ++ KE+++ K Q KKK +K EEK +K+N E
Sbjct: 1175 KNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEE 1210
>At2g42610.2 68415.m05274 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 177
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 253 AHEEKNVKQNTEKVAEGALPVYLLD-RDVQSRAKVLSNMIKQKRK 384
A+EE T A GA+ VYL + R+ Q++A+ + K+K+K
Sbjct: 111 AYEENGGPPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKK 155
>At2g42610.1 68415.m05273 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 177
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 253 AHEEKNVKQNTEKVAEGALPVYLLD-RDVQSRAKVLSNMIKQKRK 384
A+EE T A GA+ VYL + R+ Q++A+ + K+K+K
Sbjct: 111 AYEENGGPPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKK 155
>At1g65710.1 68414.m07458 expressed protein ; expression supported
by MPSS
Length = 455
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +1
Query: 190 KAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPV 315
K++ N+E E++ + K ++HEE++ K ++K + + PV
Sbjct: 40 KSEKLNQEEEEEEVVVIKHTRSHEERSKKTESDKDSPVSSPV 81
>At2g41460.1 68415.m05122 apurinic endonuclease-redox protein /
DNA-(apurinic or apyrimidinic site) lyase identical to
apurinic endonuclease-redox protein SP: P45951 from
[Arabidopsis thaliana]
Length = 536
Score = 28.7 bits (61), Expect = 3.6
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +1
Query: 187 IKAKIFNKERRNEKIQMKKKIK--AHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLS 360
IK KI N+E E + H EK VKQ+TEK + + + ++ +S +
Sbjct: 152 IKRKISNREEPTEDECTNSEAYDIEHGEKRVKQSTEKNLKAKVSAKAIAKEQKSLMRTGK 211
Query: 361 NMIKQKRKEKAGKWDVPIPK----VRAQADAEVFKVLKSGKSKRKAWK 492
I Q ++E + + K + + + +E + VL + K +K WK
Sbjct: 212 QQI-QSKEETSSTISSELLKTEEIISSPSQSEPWTVL-AHKKPQKDWK 257
>At1g76890.2 68414.m08948 trihelix DNA-binding protein / GT-2 factor
(GT2) identical to GT2 factor [Arabidopsis thaliana]
GI:416490, GI:2664202 (DNA binding factor GT-2 from
Arabidopsis)
Length = 575
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 427 AQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKK 591
A + E +KS + KRK WK + TK+T E ++ +RF+ + R K+
Sbjct: 241 ASDEEEDHHQVKSSRKKRKYWKGLFTKLT--KELMEKQEKMQKRFLETLEYREKE 293
>At1g76890.1 68414.m08947 trihelix DNA-binding protein / GT-2 factor
(GT2) identical to GT2 factor [Arabidopsis thaliana]
GI:416490, GI:2664202 (DNA binding factor GT-2 from
Arabidopsis)
Length = 498
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 427 AQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKK 591
A + E +KS + KRK WK + TK+T E ++ +RF+ + R K+
Sbjct: 164 ASDEEEDHHQVKSSRKKRKYWKGLFTKLT--KELMEKQEKMQKRFLETLEYREKE 216
>At5g25410.1 68418.m03014 expressed protein contains Pfam profile
PF03080: Arabidopsis proteins of unknown function
Length = 369
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 217 RNEKIQMKKKIKAHEEKNVKQNTE 288
+N KIQMK + HE +N NT+
Sbjct: 60 KNHKIQMKPSVSRHELRNQTDNTK 83
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 208 KERRNEKIQMKKKIKAH-EEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRK 384
+E +++ + K+K+++ +EKN + TEK+ L D + S+ K + K
Sbjct: 464 EETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEK 523
Query: 385 EKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPK 549
E K + D E K+ K S ++ K T+ E+ +++ K
Sbjct: 524 ETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETK 578
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 379 RKEKAGKWDVPIPKVRAQADAEVFKVLKSG 468
R E +W++ +P++ A D ++ +LK G
Sbjct: 396 RGESKHEWELQLPRIEASLDGKIESILKVG 425
>At2g40950.1 68415.m05056 bZIP transcription factor family protein
similar to AtbZIP transcription factor GI:17065880 from
[Arabidopsis thaliana]; contains Pfam profile: bZIP
transcription factor PF00170
Length = 721
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 406 VPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVG 522
+PIP+++ Q K KS K +A + V ++F+G
Sbjct: 334 IPIPRLKPQNTLGTSKAKKSESKKSEAKTKKVASISFLG 372
>At4g36540.2 68417.m05189 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 302
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +1
Query: 211 ERRNEKIQMKKKIKAHEE-------KNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMI 369
E + EK + KKKIKA +E K+ NTE +E P Y+ R + A ++
Sbjct: 97 EGKTEKRE-KKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLA 155
Query: 370 KQKRKEKAGK 399
++ R+EK K
Sbjct: 156 ERARREKISK 165
>At4g36540.1 68417.m05188 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 304
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +1
Query: 211 ERRNEKIQMKKKIKAHEE-------KNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMI 369
E + EK + KKKIKA +E K+ NTE +E P Y+ R + A ++
Sbjct: 97 EGKTEKRE-KKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLA 155
Query: 370 KQKRKEKAGK 399
++ R+EK K
Sbjct: 156 ERARREKISK 165
>At3g09850.1 68416.m01175 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 781
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 184 GIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPV-YLLDRDVQSRAKVLS 360
G+K K + +R+ K KK+ E + K N +K + PV ++ + S V
Sbjct: 546 GVKGKSGSLDRKKAKDSAKKRPTREERERNKSNGKKSSYADQPVSFVSSGIIDSEIAVAK 605
Query: 361 NMIKQKRKEKA 393
+++ KE A
Sbjct: 606 TSVEKVAKEVA 616
>At1g76220.1 68414.m08851 hypothetical protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 256
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 181 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAE 300
RGI ++IFNK +N+++ + + K E ++ + TEK E
Sbjct: 200 RGIVSRIFNK--KNQEVDVDELKKLRETEHEIEETEKELE 237
>At1g49610.1 68414.m05562 F-box family protein contains F-box domain
Pfam:PF00646
Length = 354
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -2
Query: 533 VKFSPT-NVTLVTMRFQAFLFDLPDFRTLNTSASAWALT-LGMGTSHFPAFSLRFCFIML 360
+KF+ + NV + + F L+D+PD+ +N+S ++ + G + +L FC
Sbjct: 113 IKFAMSRNVENLFLSFDFRLYDVPDYLYINSSVKQLSIAKILSGCPIIESLTLHFC---- 168
Query: 359 DNTLALD*TSLSS 321
D + LD T S
Sbjct: 169 DQLMVLDLTKSPS 181
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,037,558
Number of Sequences: 28952
Number of extensions: 219254
Number of successful extensions: 810
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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