Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_F15
(549 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60... 172 1e-43
At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) simi... 172 1e-43
At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Simi... 171 3e-43
At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Simi... 171 3e-43
At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.51
At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transfera... 30 1.2
At5g25320.1 68418.m03004 ACT domain-containing protein contains ... 29 1.5
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 29 1.5
At4g24350.1 68417.m03494 phosphorylase family protein contains P... 29 2.0
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 29 2.0
At3g32030.1 68416.m04070 terpene synthase/cyclase family protein... 29 2.0
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 2.7
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 29 2.7
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 29 2.7
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 29 2.7
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 2.7
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 29 2.7
At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative... 28 3.6
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim... 27 6.2
At3g52020.1 68416.m05706 serine carboxypeptidase S10 family prot... 27 6.2
At2g43030.1 68415.m05340 ribosomal protein L3 family protein con... 27 6.2
At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138... 27 6.2
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 27 8.3
At5g41240.1 68418.m05011 glutathione S-transferase, putative sim... 27 8.3
At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.3
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 27 8.3
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 8.3
At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger) fa... 27 8.3
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 27 8.3
At1g76990.3 68414.m08966 ACT domain containing protein low simil... 27 8.3
At1g76990.2 68414.m08965 ACT domain containing protein low simil... 27 8.3
At1g76990.1 68414.m08964 ACT domain containing protein low simil... 27 8.3
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 27 8.3
>At1g57860.1 68414.m06565 60S ribosomal protein L21 similar to 60S
ribosomal protein L21 GI:3885884 from [Oryza sativa]
Length = 164
Score = 172 bits (418), Expect = 1e-43
Identities = 79/145 (54%), Positives = 106/145 (73%)
Frame = +3
Query: 90 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 269
LFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++NVT A+G
Sbjct: 14 LFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVG 73
Query: 270 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLXRVKENERLLKEAKAAGKTVNLKRQPA 449
V VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L +AKA G+T++ KRQP
Sbjct: 74 VEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPK 133
Query: 450 PPKAAHIVSGTXKPVLLAPIPYEFV 524
PK +V G + PIPY+ V
Sbjct: 134 GPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g57660.1 68414.m06543 60S ribosomal protein L21 (RPL21E) similar
to 60S ribosomal protein L21 GB:Q43291 GI:2851508 from
[Arabidopsis thaliana]
Length = 164
Score = 172 bits (418), Expect = 1e-43
Identities = 79/145 (54%), Positives = 106/145 (73%)
Frame = +3
Query: 90 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 269
LFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++NVT A+G
Sbjct: 14 LFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVG 73
Query: 270 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLXRVKENERLLKEAKAAGKTVNLKRQPA 449
V VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L +AKA G+T++ KRQP
Sbjct: 74 VEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTKRQPK 133
Query: 450 PPKAAHIVSGTXKPVLLAPIPYEFV 524
PK +V G + PIPY+ V
Sbjct: 134 GPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g09690.1 68414.m01088 60S ribosomal protein L21 (RPL21C) Similar
to ribosomal protein L21 (gb|L38826). ESTs
gb|AA395597,gb|ATTS5197 come from this gene
Length = 164
Score = 171 bits (416), Expect = 3e-43
Identities = 79/145 (54%), Positives = 105/145 (72%)
Frame = +3
Query: 90 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 269
LFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++NVT A+G
Sbjct: 14 LFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVG 73
Query: 270 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLXRVKENERLLKEAKAAGKTVNLKRQPA 449
V VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L AKA G+T++ KRQP
Sbjct: 74 VEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPK 133
Query: 450 PPKAAHIVSGTXKPVLLAPIPYEFV 524
PK +V G + PIPY+ V
Sbjct: 134 GPKPGFMVEGMTLET-VTPIPYDVV 157
>At1g09590.1 68414.m01076 60S ribosomal protein L21 (RPL21A) Similar
to L21 family of ribosomal protein; amino acid sequence
is identical to F21M12.8
Length = 164
Score = 171 bits (416), Expect = 3e-43
Identities = 79/145 (54%), Positives = 105/145 (72%)
Frame = +3
Query: 90 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 269
LFAR FR G IPLSTY++ +KVGD VD++ NGA+ KGMPHK YHG+TGR++NVT A+G
Sbjct: 14 LFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVG 73
Query: 270 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLXRVKENERLLKEAKAAGKTVNLKRQPA 449
V VNK++ RII KRI++RVEHV+ S+C ++F R K+N+ L AKA G+T++ KRQP
Sbjct: 74 VEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPK 133
Query: 450 PPKAAHIVSGTXKPVLLAPIPYEFV 524
PK +V G + PIPY+ V
Sbjct: 134 GPKPGFMVEGMTLET-VTPIPYDVV 157
>At5g05900.1 68418.m00651 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 450
Score = 31.1 bits (67), Expect = 0.51
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 317 DALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHV 138
+ L++ L N S V + + FVW LLN SDV+ V +H
Sbjct: 335 EVLKHQAIGGFLTHNGWNSTVESVFEGVPMICMPFVWDQLLNARFVSDVWMVG--LHLEG 392
Query: 137 RGERN 123
R ERN
Sbjct: 393 RIERN 397
>At5g05890.1 68418.m00649 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 455
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Frame = -2
Query: 317 DALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHV 138
D L++ L N S V A + + F W +LN SDV+ V ++
Sbjct: 340 DVLKHRAIGGFLTHNGWSSTVESVCEAVPMICLPFRWDQMLNARFVSDVWMVG--INLED 397
Query: 137 RGERNS------SMCAEPASEQVR 84
R ERN + EP E +R
Sbjct: 398 RVERNEIEGAIRRLLVEPEGEAIR 421
>At5g25320.1 68418.m03004 ACT domain-containing protein contains
Pfam ACT domain PF01842
Length = 500
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +2
Query: 188 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ----QACSRKDYTEAHQ 319
C +GY+ ++ KDR R+ D C+ D Q A R D +A Q
Sbjct: 291 CEERGYSIVTVKSKDRRRLMFDTICTLVDMQYVIFHAALRSDGADAFQ 338
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRV--QRDCSCSRCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA QS WK +++ RD RCDC SRKD H+ C
Sbjct: 156 EKKWKCEKCSKFYAVQS-DWKAHTKICGTRDY---RCDCGTLFSRKDTFITHRAFC 207
>At4g24350.1 68417.m03494 phosphorylase family protein contains Pfam
PF01048: Phosphorylase family
Length = 336
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 176 DVYNVSNFVHFHVRGERNSSM 114
DV+NV VHF + G N+SM
Sbjct: 114 DVFNVKGIVHFGIAGNMNNSM 134
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA S WK S++ C RCDC SRKD H+ C
Sbjct: 142 EKKWKCDKCSKKYAVMS-DWKAHSKI---CGTKEYRCDCGTLFSRKDSFITHRAFC 193
>At3g32030.1 68416.m04070 terpene synthase/cyclase family protein
contains Pfam profile: PF01397 terpene synthase family
Length = 604
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 380 FDSXKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVV 243
FDS ++L AL VL +N DI S +V+ M+ H V
Sbjct: 482 FDSKPKILQALSVLYRINNDIVTYEREMSKGEVVNGVNSYMNQHGV 527
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA QS WK S++ C +CDC SR+D H+ C
Sbjct: 134 EKKWKCEKCSKKYAVQS-DWKAHSKI---CGTKEYKCDCGTLFSRRDSFITHRAFC 185
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA QS WK S++ C +CDC SR+D H+ C
Sbjct: 136 EKKWKCDKCSKKYAVQS-DWKAHSKI---CGTKEYKCDCGTLFSRRDSFITHRAFC 187
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 156 EKKWKCEKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTIFSRRDSYITHRAFC 207
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 154 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTLFSRRDSFITHRAFC 205
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +2
Query: 161 RHCRHQRQWCS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+H H++ C SKGYA QS D + C CDC + SR + HQ C
Sbjct: 141 KHSNHKQWICERCSKGYAVQS----DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 196
Query: 329 *ACQALQVQTRLP*XSQRE*EATE 400
++ RL Q AT+
Sbjct: 197 TVRRSQPSNHRLHEQQQHTTNATQ 220
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 155 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTKEYRCDCGTIFSRRDSYITHRAFC 206
>At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
Ferredoxin--NADP reductase, chloroplast precursor (EC
1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
{Mesembryanthemum crystallinum} SP|P41343, {Spinacia
oleracea} SP|P00455, [Capsicum annuum] GI:6899972
Length = 369
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 78 APAHLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTA 257
AP + F G IP Y+ G V + +G + G PHKV R+Y++ +
Sbjct: 108 APGETWHMVFSHQGEIP-------YREGQSVGVIADGIDKNGKPHKV------RLYSIAS 154
Query: 258 HALGVIVN 281
ALG + N
Sbjct: 155 SALGDLGN 162
>At5g41220.1 68418.m05009 glutathione S-transferase, putative
similar to emb|CAA10662
Length = 590
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 110 HTWNYSALHVHESVQSWRHCRHQRQWCS 193
+T NY + E +WR RH ++WCS
Sbjct: 370 YTNNYKSNFTLE--HAWRELRHSKKWCS 395
>At3g52020.1 68416.m05706 serine carboxypeptidase S10 family protein
similar to SP|P52711 Serine carboxypeptidase II-3
precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam
profile PF0450 serine carboxypeptidase
Length = 501
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 514 YGIGASKTGXSVPLTMWAALGGAGC 440
Y + A+KT S+PL +W GG GC
Sbjct: 111 YFVEATKTKKSLPLVLWLN-GGPGC 134
>At2g43030.1 68415.m05340 ribosomal protein L3 family protein
contains Pfam profile PF00297: ribosomal protein L3
Length = 271
Score = 27.5 bits (58), Expect = 6.2
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Frame = +3
Query: 144 KVYKVGDIVDIRGNGAVQKGMPH--KVYHGKTGRV-YNVTAH-ALGVIVNKRVRGRIIP- 308
+++K GD+VD+ G + KG K +H K G++ + +H ALG I GR+
Sbjct: 155 EIFKEGDLVDVAGT-TIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKG 213
Query: 309 KRINIRVEHVKHSKCRQDFLXRV-KENERLLKEAKAAGKTVNLKR 440
K++ R+ + +K R+ + +V KE ++ + GK NL R
Sbjct: 214 KKMPGRMGGTR-TKIRKLKIVKVDKELNVVMIKGALPGKPGNLLR 257
>At1g62330.1 68414.m07033 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 672
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 201 GMPHKVYHGKTGRVYNVTAHALGVIVNK 284
G P K Y+G GR+ AHAL NK
Sbjct: 182 GKPKKTYNGTYGRLLAYAAHALAEGQNK 209
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C +K YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 139 EKKWTCEKCAKRYAVQS-DWKAHSKT---CGTREYRCDCGTIFSRRDSFITHRAFC 190
>At5g41240.1 68418.m05011 glutathione S-transferase, putative
similar to glutathione S-transferase, GST 10b
GB:CAA10662 [Arabidopsis thaliana] 37349.
Length = 591
Score = 27.1 bits (57), Expect = 8.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 155 SWRHCRHQRQWCSS 196
+WR RH ++WCS+
Sbjct: 385 AWRELRHNKKWCST 398
>At5g05880.1 68418.m00647 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -2
Query: 317 DALRYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHV 138
+ L++ L N S V + + F W LLN SDV+ V +H
Sbjct: 336 EVLKHRAIGGFLTHNGWNSTVESVCEGVPMICLPFRWDQLLNARFVSDVWMVG--IHLEG 393
Query: 137 RGERN 123
R ER+
Sbjct: 394 RIERD 398
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C SK YA QS WK ++ C +CDC SRKD H+ C
Sbjct: 156 EKKWKCEKCSKKYAVQS-DWKAHAKT---CGTREYKCDCGTLFSRKDSFITHRAFC 207
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = +2
Query: 260 CSRCD----CQQACSRKDYTEAHQYPC 328
CSRC C C R D++ HQ C
Sbjct: 72 CSRCKSVRYCSAECQRSDWSSGHQRNC 98
>At3g63530.1 68416.m07156 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 135 TYMKVYKVGDIVDIRGNGAVQK---GMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRII 305
TY ++ ++G+ V G Q+ +P K Y K G +++ ++ + ++ +I
Sbjct: 151 TYEELVELGEAVGTESRGLSQELIETLPTKKY--KFGSIFSRKRAGERCVICQ-LKYKIG 207
Query: 306 PKRINIRVEHVKHSKCRQDFL 368
+++N+ +HV HS+C +L
Sbjct: 208 ERQMNLPCKHVYHSECISKWL 228
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 312 RINIRVEHVKHSKCRQDFLXRVKENERL 395
+ ++++EHV S RQ+F +K NE++
Sbjct: 920 KFHVKIEHVDRSVRRQEFGRIIKTNEKV 947
>At1g76990.3 68414.m08966 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 188 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 280
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g76990.2 68414.m08965 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 188 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 280
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g76990.1 68414.m08964 ACT domain containing protein low
similarity to uridylyltransferase SP|P56884 from
Rhizobium meliloti; contains Pfam ACT domain PF01842
Length = 453
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 188 CSSKGYATQSIPWKDRSRVQRDCSCSRCDCQ 280
C KGY+ ++ +DR ++ D C+ D Q
Sbjct: 259 CEEKGYSVINVSCEDRPKLMFDIVCTLTDMQ 289
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 176 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 328
+++W C +K YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 143 EKKWKCEKCAKRYAVQS-DWKAHSKT---CGTREYRCDCGTIFSRRDSFITHRAFC 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,644,602
Number of Sequences: 28952
Number of extensions: 234671
Number of successful extensions: 762
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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