Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_F12
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   2.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.8  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 490 TRTCKEISSSCYR 528
           + TC+E+S  CY+
Sbjct: 346 SETCEEVSKKCYK 358


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +2

Query: 302 EKQPIPEPEQTGDGPEKKITKLAIGVEGGFDPECGKPKFTYTDHYSVVVLPGFH 463
           + QP PEP    D P+      AIG     D    K +  YTDH  V +   F+
Sbjct: 133 QSQPNPEPADFADAPD------AIGKTRTKD----KYRVVYTDHQRVELEKEFY 176


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 461 HTFPWPDPNLPEPVKKSVQAVIDAESPFKIAEL 559
           H+FP+   +LP+  K    +     +P ++AE+
Sbjct: 250 HSFPFTAESLPDLTKYGAYSPKKVYAPEEVAEI 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 488  LPEPVKKSVQAVIDAESPFKI 550
            +P P   + Q+++D +S FK+
Sbjct: 1805 VPPPQHSTTQSLVDPKSEFKV 1825


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 171 IYTFVFVHKLMRSWQF 124
           IY+ + V ++MRSW +
Sbjct: 26  IYSLLRVKRMMRSWYY 41


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 125 NCQDRISLC 151
           NCQ+RI+LC
Sbjct: 57  NCQNRINLC 65


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 402 HSGSKPPSTPMASLVIFFSGPSP 334
           H G+ PP +P        S P+P
Sbjct: 30  HHGATPPQSPNQQYTKDCSSPTP 52


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = -2

Query: 621 RLTECTETSRFSPSQVPCNAANSAILNG 538
           + T C++   F P Q   N      +NG
Sbjct: 25  KYTGCSDNDGFLPGQGRVNQLGGVFING 52


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 302 EKQPIPEPEQTGDGPE 349
           + QP PEP    D P+
Sbjct: 133 QSQPNPEPADFADAPD 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,437
Number of Sequences: 336
Number of extensions: 3851
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)