Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E22
(656 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 207 6e-54
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 112 2e-25
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 97 1e-20
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 97 1e-20
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 95 4e-20
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 89 2e-18
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 84 7e-17
At5g13650.2 68418.m01585 elongation factor family protein contai... 83 1e-16
At5g13650.1 68418.m01584 elongation factor family protein contai... 83 1e-16
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 80 1e-15
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 69 4e-12
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 69 4e-12
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 48 4e-06
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 37 0.010
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 36 0.031
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 36 0.031
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 36 0.031
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 36 0.031
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 36 0.031
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 33 0.13
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 31 0.51
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 31 0.89
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 31 0.89
At2g31060.1 68415.m03790 elongation factor family protein contai... 31 0.89
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.6
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 2.1
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.1
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.7
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 28 4.8
At3g28790.1 68416.m03593 expressed protein 27 8.3
At3g08670.1 68416.m01007 expressed protein 27 8.3
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 27 8.3
At1g12080.2 68414.m01397 expressed protein 27 8.3
At1g12080.1 68414.m01396 expressed protein 27 8.3
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 207 bits (505), Expect = 6e-54
Identities = 111/187 (59%), Positives = 132/187 (70%)
Frame = +3
Query: 96 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 275
DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR DE +R
Sbjct: 7 DELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAER 66
Query: 276 CITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVT 455
ITIKST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTAALR+T
Sbjct: 67 GITIKSTGISLYYEMTDESLKSFTG--ARDGNE--YLINLIDSPGHVDFSSEVTAALRIT 122
Query: 456 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXLYXTFXRI 635
DGAL QTETVLRQA+ ERI+P+L +NKMDR Y TF R+
Sbjct: 123 DGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR-CFLELQVDGEEAYQTFSRV 181
Query: 636 VXNVNVI 656
+ N NVI
Sbjct: 182 IENANVI 188
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 112 bits (269), Expect = 2e-25
Identities = 70/179 (39%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
Frame = +3
Query: 126 RNIRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGETRFTDTRKDEQDRCITIKSTA 299
R +RN+ ++AHVDHGK+TL D L++ +G ++ AG+ RF D +EQ R IT+KS++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMKSSS 66
Query: 300 ISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 479
IS+ + K + +NLIDSPGH+DF SEV+ A R++DGAL
Sbjct: 67 ISLKY--------------------KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVD 106
Query: 480 XXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXLYXTFXRIVXNVNVI 656
QT VLRQA E++ P L +NK+DR Y RIV VN I
Sbjct: 107 AVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDR-LIFELRLSPMEAYTRLIRIVHEVNGI 164
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 96.7 bits (230), Expect = 1e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +3
Query: 108 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 278
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 279 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 458
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 459 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDR 273
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 96.7 bits (230), Expect = 1e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +3
Query: 108 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRC 278
G+M +RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERN 189
Query: 279 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 458
I+IK+ +S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ D
Sbjct: 190 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLAD 234
Query: 459 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 235 GAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDR 273
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 95.1 bits (226), Expect = 4e-20
Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +3
Query: 108 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET---RFTDTRKDEQDRC 278
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERN 175
Query: 279 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 458
I+IK+ +S+ E D R KS +L N++D+PG+V+FS E+TA+LR+ D
Sbjct: 176 ISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLAD 220
Query: 459 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
GA+ TE +R AI + + ++ +NK+DR
Sbjct: 221 GAVFIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKVDR 259
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 89.0 bits (211), Expect = 2e-18
Identities = 54/148 (36%), Positives = 80/148 (54%)
Frame = +3
Query: 132 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 311
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+K+ +MF
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITVKAQTATMF 122
Query: 312 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 491
+E + +D + G+L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 123 YENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Query: 492 XXXQTETVLRQAIAERIKPILFMNKMDR 575
QT A + + +NK+D+
Sbjct: 172 VQAQTVANFYLAFEANLTIVPVINKIDQ 199
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 84.2 bits (199), Expect = 7e-17
Identities = 55/148 (37%), Positives = 76/148 (51%)
Frame = +3
Query: 129 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 308
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R ITIK A M
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQAARM 143
Query: 309 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 488
+ E+ F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 144 RYVYEDTP----------------FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 187
Query: 489 XXXXQTETVLRQAIAERIKPILFMNKMD 572
QT + A+ ++ I +NK+D
Sbjct: 188 GVEAQTLANVYLALENNLEIIPVLNKID 215
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 77 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 136
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 473
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 137 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 176
Query: 474 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
QT VL++A+ ++ +NK+DR
Sbjct: 177 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 210
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 135
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 473
S+ + K +N+ID+PGH DF EV L + DG L
Sbjct: 136 KNTSITY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLV 175
Query: 474 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
QT VL++A+ ++ +NK+DR
Sbjct: 176 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDR 209
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 80.2 bits (189), Expect = 1e-15
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 126 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKS 293
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R ITI S
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITITS 151
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXX 473
A + F++ IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 152 AATTTFWDKHR--------------------INIIDTPGHVDFTLEVERALRVLDGAICL 191
Query: 474 XXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
Q+ETV RQA + I F+NKMDR
Sbjct: 192 FDSVAGVEPQSETVWRQADKYGVPRICFVNKMDR 225
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 68.5 bits (160), Expect = 4e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 278
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 279 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 458
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 459 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 68.5 bits (160), Expect = 4e-12
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRC 278
MDK +RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKG 118
Query: 279 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 458
ITI+S A + K + +N+ID+PGHVDF+ EV ALRV D
Sbjct: 119 ITIQSAATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLD 158
Query: 459 GALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
GA+ Q+ TV RQ + + F+NK+DR
Sbjct: 159 GAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 48.4 bits (110), Expect = 4e-06
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 1/158 (0%)
Frame = +3
Query: 105 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCIT 284
RG ++K+ N+ I HVDHGK+TLT +L I + A + D +E+ R IT
Sbjct: 70 RGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGIT 129
Query: 285 IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 464
I + + +E E + +D PGH D+ + DGA
Sbjct: 130 INTATVE--YETENRHYAH------------------VDCPGHADYVKNMITGAAQMDGA 169
Query: 465 LXXXXXXXXXXXQT-ETVLRQAIAERIKPILFMNKMDR 575
+ QT E +L ++F+NK D+
Sbjct: 170 ILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQ 207
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +3
Query: 138 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 317
N++++ HVD GKSTL+ L+ G R + + K+ + + + A ++
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLG-----RISQKQMHKYEKEAKLQGKGSFAYAWALDES 295
Query: 318 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 467
EE++ + K + L+DSPGH DF + A D A+
Sbjct: 296 AEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAI 345
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 35.5 bits (78), Expect = 0.031
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 467
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 35.5 bits (78), Expect = 0.031
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Frame = +3
Query: 138 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 317
N+ I HVDHGK+TLT ++ A+A D +E+ R ITI + + +E
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVE--YE 126
Query: 318 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 497
++ +D PGH D+ + DG +
Sbjct: 127 TAKRHYAH------------------VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPM 168
Query: 498 XQTETVLRQAIAERIKPIL-FMNKMD 572
QT+ + A + ++ F+NK+D
Sbjct: 169 PQTKEHILLARQVGVPSLVCFLNKVD 194
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.031
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 467
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.031
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 467
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 35.5 bits (78), Expect = 0.031
Identities = 35/118 (29%), Positives = 53/118 (44%)
Frame = +3
Query: 114 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 293
M K++ N+ VI HVD GKST T L+ K G I R E RF + R + K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKY 56
Query: 294 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 467
+ + E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 396 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
+D+PGH F + RVTD A+ QT + A A + ++ +NK+D+
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDK 616
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 141 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 242
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 372 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 551
+ G I +D+PGH FS VTD + QT + A + + +
Sbjct: 265 DSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVV 324
Query: 552 LFMNKMDR 575
+ +NK D+
Sbjct: 325 VAINKCDK 332
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 141 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 233
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 514 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 416
T S T PD ST T APSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 514 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 416
T S T PD ST T APSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 450 VTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 575
+ +GA+ QT+ VL +A+ ++PIL +NK+DR
Sbjct: 1 MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDR 42
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 151 SPTSITASQPSRTRWFPRPVSLLVRE 228
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 169 ASQPSRTRWFPRPVSLLVREPERPVSLTRVR-TNKTVASPLNLRPSLCSSSLKRK 330
A Q S + W PR S + P++ + T+ V+ N PS+ S LKRK
Sbjct: 695 AKQSSSSPWVPRHTSSVAHPPKQENYIKHHNSTSSRVSKESNRTPSVSSYPLKRK 749
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 387 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNK 566
I +ID+PGH F++ + + D A+ QT L +K I+ +NK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIALNK 617
Query: 567 MDR 575
+DR
Sbjct: 618 VDR 620
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 151 SPTSITASQPSRTRWFPRPVSLLVRE 228
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 536 LGNSLTQYCFGLYTHTRHTVNNHKGSISDTECSCYFRREIN 414
L N + C Y HTV HKGS D +C ++RE N
Sbjct: 299 LSNRSSDRCRSKY-QLIHTVRTHKGS-DDNAFNCVYQREDN 337
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.5 bits (58), Expect = 8.3
Identities = 25/68 (36%), Positives = 32/68 (47%)
Frame = -2
Query: 517 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 338
ST + T TP T + +T APS T +A TSE+ S + K S S SG V
Sbjct: 294 STPTPSTPTPSTPTPSTPAPS-TPAAGKTSEKGSESASMKKESNSKSES-ESAASGSVSK 351
Query: 337 TKSFSSSS 314
TK + S
Sbjct: 352 TKETNKGS 359
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 151 SPTSITASQPSRTRWFPRPVSLLVREPE--RPVSLTRVRTNKTVASPLNLRPSLCSSSL- 321
SP+SI + + + RP S R RP + TR + ++P +RP SSS+
Sbjct: 175 SPSSILNTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSSSMD 234
Query: 322 KRKI*YSSQTLTSVKR 369
K + SS+ T R
Sbjct: 235 KARPSLSSRPSTPTSR 250
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = +3
Query: 117 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKST 296
+KKR++ N+ I HVD GKST+ ++ +G + + + K+ +D+
Sbjct: 97 NKKRHL-NVVFIGHVDAGKSTIGGQILFLSG-----QVDDRQIQKYEKEAKDKSRESWYM 150
Query: 297 AISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF 422
A M EE+ + + ++D+PGH +
Sbjct: 151 AYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSY 192
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 505 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 413
V T TP + +A VT + AV EEK T
Sbjct: 85 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 505 VCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 413
V T TP + +A VT + AV EEK T
Sbjct: 51 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,253,771
Number of Sequences: 28952
Number of extensions: 263185
Number of successful extensions: 894
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -