Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E21
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 252 7e-66
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 236 4e-61
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 132 6e-56
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 193 3e-48
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 179 5e-44
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 158 1e-37
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 152 8e-36
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 139 5e-32
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 134 2e-30
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 125 8e-28
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 123 3e-27
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 115 1e-24
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 69 7e-11
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 68 2e-10
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 55 1e-06
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 49 1e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-04
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 46 0.001
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.022
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 31 0.026
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 41 0.029
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 39 0.12
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.36
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 35 1.9
UniRef50_Q5Z5Q3 Cluster: Translation initiation factor eIF-4F is... 33 5.8
UniRef50_Q245P1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q1VR56 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 252 bits (616), Expect = 7e-66
Identities = 114/163 (69%), Positives = 128/163 (78%)
Frame = +2
Query: 149 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 328
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 329 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 508
Y TG E+NVEPVD+GP AF C+LDVGLARTTTGAR
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGAR 158
Query: 509 VFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
VFGAMKGAVDGGLN+PHS+KRFP Y A +K FNA+VHRAHIFG
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFG 201
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKF 92
MGFVKVVKNKQYFKRYQVKF
Sbjct: 1 MGFVKVVKNKQYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.82
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 97 RRREGKTDYYARKRL 141
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 236 bits (577), Expect = 4e-61
Identities = 106/165 (64%), Positives = 124/165 (75%)
Frame = +2
Query: 143 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 322
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 323 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 502
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 503 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
+VFGA+KGAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI G
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMG 201
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKF 92
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.82
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 97 RRREGKTDYYARKRL 141
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 132 bits (319), Expect(2) = 6e-56
Identities = 60/73 (82%), Positives = 62/73 (84%)
Frame = +2
Query: 419 EYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSK 598
EYNVE V+NGP AF CYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFP YDA SK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 599 KFNAEVHRAHIFG 637
FNAE HRAHIFG
Sbjct: 158 TFNAEAHRAHIFG 170
Score = 108 bits (259), Expect(2) = 6e-56
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = +2
Query: 143 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 301
+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 37 IVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKF 92
MGFVKVVKNKQYFKR+QVKF
Sbjct: 1 MGFVKVVKNKQYFKRFQVKF 20
Score = 35.9 bits (79), Expect = 0.82
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 97 RRREGKTDYYARKRL 141
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 193 bits (471), Expect = 3e-48
Identities = 92/164 (56%), Positives = 110/164 (67%)
Frame = +2
Query: 146 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 325
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 326 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGA 505
AY+TG +YNVE + F LD+GLARTTTG+
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156
Query: 506 RVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
++F MKG DGG+NVPHS RF +D SK++NAE HR I G
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILG 200
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVK 89
MG VKV+KNK YFKRYQVK
Sbjct: 1 MGLVKVIKNKAYFKRYQVK 19
Score = 35.9 bits (79), Expect = 0.82
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 97 RRREGKTDYYARKRL 141
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 179 bits (436), Expect = 5e-44
Identities = 81/165 (49%), Positives = 103/165 (62%)
Frame = +2
Query: 143 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 322
+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYA
Sbjct: 46 ITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYA 105
Query: 323 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 502
A Y+TG +Y+VE D F C+LD GL RT+TG
Sbjct: 106 ATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTG 165
Query: 503 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
ARVF A+KGAVDGGL++PH+ KRF YD K + + +I G
Sbjct: 166 ARVFAALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYIKG 210
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 158 bits (383), Expect = 1e-37
Identities = 78/171 (45%), Positives = 102/171 (59%), Gaps = 6/171 (3%)
Frame = +2
Query: 143 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 322
++QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYA
Sbjct: 60 VLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYA 119
Query: 323 AAYSTG------XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGL 484
AAY+TG + + E D F LDVGL
Sbjct: 120 AAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGL 179
Query: 485 ARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
ARTTTGARVFG +KGAVDGG+ VPH RFP Y+ +A+VHR IFG
Sbjct: 180 ARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFG 230
Score = 37.9 bits (84), Expect = 0.20
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKF 92
M FVKVVKNK YFKR+QVK+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKY 43
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 152 bits (368), Expect = 8e-36
Identities = 73/170 (42%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Frame = +2
Query: 143 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 322
++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YA
Sbjct: 326 IIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYA 385
Query: 323 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 502
AAY+TG +NV+ F LD GL RTTTG
Sbjct: 386 AAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTG 445
Query: 503 ARVFGAMKGAVDGGLNVPHSIKRFPXY-----DAXSKKFNAEVHRAHIFG 637
RVFG +KGA DGG+N+PHS RFP Y + S K+ E H+A IFG
Sbjct: 446 NRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFG 495
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKF 92
+GFVKV+K K YFKR+Q K+
Sbjct: 13 LGFVKVLKTKAYFKRFQTKY 32
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 139 bits (337), Expect = 5e-32
Identities = 71/168 (42%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
Frame = +2
Query: 143 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 322
+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYA
Sbjct: 37 IVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYA 96
Query: 323 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 502
AAY+TG + N++ P F LD+GL R+T G
Sbjct: 97 AAYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLG 151
Query: 503 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAXS---KKFNAEVHRAHIFG 637
RVF A+KGA DGG+++PH+ +RFP + + +K++A VH+ IFG
Sbjct: 152 NRVFAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRIFG 199
Score = 34.3 bits (75), Expect = 2.5
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 97 RRREGKTDYYARKRLACSGQEQ 162
RRREGKTDYYAR RL +++
Sbjct: 22 RRREGKTDYYARSRLIVQDKDK 43
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 134 bits (324), Expect = 2e-30
Identities = 76/180 (42%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Frame = +2
Query: 107 KGKLIIMLVNASLVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELP 286
+GK A ++QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL
Sbjct: 25 EGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELI 84
Query: 287 RYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXA 457
RYG+ VGL NYAAAY+TG E + +
Sbjct: 85 RYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKP 144
Query: 458 FXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
+LDVG+ RTTTG RVF A+KGA DGGLN+PH RFP +FN E R +I G
Sbjct: 145 IKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFP---GSKNEFNPEQLRKNILG 201
Score = 39.1 bits (87), Expect = 0.088
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKF 92
M +VKVVKNK YFKRYQVK+
Sbjct: 1 MAYVKVVKNKAYFKRYQVKY 20
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 125 bits (302), Expect = 8e-28
Identities = 68/150 (45%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Frame = +2
Query: 197 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 376
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 377 XXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 556
Y+VE +N F LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 557 HSIKRFPXYDAXSKK---FNAEVHRAHIFG 637
HS KRFP Y + ++A+ HR IFG
Sbjct: 124 HSEKRFPGYSVDEENNGTYDAQAHRDRIFG 153
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 123 bits (297), Expect = 3e-27
Identities = 64/141 (45%), Positives = 81/141 (57%)
Frame = +2
Query: 149 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 328
QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AA
Sbjct: 38 QDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAA 97
Query: 329 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 508
Y+TG EY + + P F LDVGLARTTTGA+
Sbjct: 98 YATG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAK 152
Query: 509 VFGAMKGAVDGGLNVPHSIKR 571
VF MKGAVDGGL +PH++ R
Sbjct: 153 VFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 115 bits (276), Expect = 1e-24
Identities = 64/164 (39%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 149 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 328
QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 329 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPXAFXCYLDVGLARTTTGA 505
Y+TG Y+V + +D A +LD+GLAR+T GA
Sbjct: 93 YATGFLIGRRALTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFLDIGLARSTRGA 150
Query: 506 RVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
RVFGA+KGA D GLNVPHS +F + F+A+ IFG
Sbjct: 151 RVFGALKGASDAGLNVPHSAAKFYGHKPDG-SFDAKELHDRIFG 193
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 185 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 340
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = +2
Query: 479 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
GLARTTTG +VFGA+K VD GL++PHS K FP YD+ SK+FNAEV+ I G
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMG 123
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 69.3 bits (162), Expect = 7e-11
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +2
Query: 419 EYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSK 598
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF +K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 599 KFNAEVHRAHIFG 637
+ +A+VHR I+G
Sbjct: 102 QLDAKVHRKSIYG 114
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/141 (28%), Positives = 65/141 (46%)
Frame = +2
Query: 149 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 328
QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 329 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 508
Y G YN + N +D+GL R T G +
Sbjct: 99 YLLGYYFGKDLIEKVKQSET-----------YNKK---NYSSKITAIIDIGLKRATIGNK 144
Query: 509 VFGAMKGAVDGGLNVPHSIKR 571
F +MKG+VD G+N+PH+ +
Sbjct: 145 SFASMKGSVDSGINIPHNYNK 165
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 149 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 250
QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 470 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 577
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 182 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 340
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +2
Query: 470 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 577
LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 106 LDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 176 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 340
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2
Query: 470 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 577
LDVGL + G+RVF A+KGA+D G+ +PHS + P
Sbjct: 104 LDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILP 139
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 470 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 577
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 37.1 bits (82), Expect = 0.36
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 182 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 340
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 31.1 bits (67), Expect(2) = 0.026
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 458 FXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 562
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
Score = 29.1 bits (62), Expect(2) = 0.026
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 176 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 340
K+R +N +++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 48 KFRSYFTTTNTNLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 40.7 bits (91), Expect = 0.029
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 470 LDVGLARTTTGARVFGAMKGAVDGGLNVPHS 562
LD+GL T G++VF +GA+D GL++PH+
Sbjct: 103 LDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect = 0.067
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +2
Query: 176 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 340
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 38.7 bits (86), Expect = 0.12
Identities = 39/133 (29%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +2
Query: 182 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXX 358
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVGYIA--- 84
Query: 359 XXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGARVFGAMKGAVD 538
+E NG + LD G + G R+ +KG D
Sbjct: 85 ----------------------GIESEKNGVES--AVLDTGRRKFRKGGRIAACLKGFTD 120
Query: 539 GGLNVPHSIKRFP 577
G+ VPH FP
Sbjct: 121 AGIEVPHGEDVFP 133
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.36
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 470 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 577
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 64 NTSRGTK*NSTRRREGKTDYYARKRLACSGQEQI*HT*ISSDCASLQQRCNMP 222
N + K R +EGKTDYYARKRL + + +T D + QR ++P
Sbjct: 30 NANHHAKLRFRRWQEGKTDYYARKRLEIQDKNEY-NTPEXDDSSCNXQRYHLP 81
>UniRef50_Q5Z5Q3 Cluster: Translation initiation factor eIF-4F
isozyme form subunit p82-like; n=4; Oryza sativa|Rep:
Translation initiation factor eIF-4F isozyme form
subunit p82-like - Oryza sativa subsp. japonica (Rice)
Length = 711
Score = 33.1 bits (72), Expect = 5.8
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 50 CEEQTILQEVPSKIQRGVVKGKLIIMLVNASLVQ--DKNKYNTPKYRLI-VRLSNKDV-- 214
C+ I EVP IQRG++ GK ++ S++ ++ K +LI R+S+ D+
Sbjct: 359 CKSTLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILK 418
Query: 215 -TCQVAYSRIEGDHIVCAAYS 274
+ + ++ + C+ Y+
Sbjct: 419 DVINLIFEKVVAEPAFCSTYA 439
>UniRef50_Q245P1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1730
Score = 33.1 bits (72), Expect = 5.8
Identities = 15/71 (21%), Positives = 34/71 (47%)
Frame = -3
Query: 241 NPRVGHLACYIFVGETHNQTIFRCVIFVLVLNKRGVYEHNNQFSLHDASLNFTWYLLKYC 62
NP++ +IF + N++I++ + + L + + +Q + +S ++ C
Sbjct: 1293 NPKISMQIVFIFACQNENESIYQSISLLSNLVSQILISQKDQLGIIISSFQHSYIQQYQC 1352
Query: 61 LFFTTLTNPIF 29
L F ++ PIF
Sbjct: 1353 LTFVSMIKPIF 1363
>UniRef50_Q1VR56 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 430
Score = 32.7 bits (71), Expect = 7.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 163 FVLVLNKRGVYEHNNQFSLHDASLNFTWYLLKYCL-FFTTL 44
FV++ N G+ EH Q S+ + +N TW ++ + FFT L
Sbjct: 269 FVMISNDAGITEHKYQISIQEPVVNGTWVKVEIPMSFFTDL 309
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,819,740
Number of Sequences: 1657284
Number of extensions: 11162449
Number of successful extensions: 27437
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 26472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27419
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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