Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E02
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 33 0.15
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 33 0.20
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 33 0.27
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.35
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.35
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.35
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 32 0.35
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 31 0.62
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 31 0.62
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 31 0.62
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 31 0.62
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 31 0.62
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 31 1.1
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 31 1.1
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 30 1.9
SB_2309| Best HMM Match : Fasciclin (HMM E-Value=0) 30 1.9
SB_32863| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-06) 29 2.5
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 29 2.5
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 29 3.3
SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 4.4
SB_36417| Best HMM Match : MFS_1 (HMM E-Value=0.0037) 29 4.4
SB_53776| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.5e-12) 28 5.8
SB_37309| Best HMM Match : Toxin_29 (HMM E-Value=1.2) 28 5.8
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 28 7.6
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_50828| Best HMM Match : IspA (HMM E-Value=0.88) 28 7.6
SB_16151| Best HMM Match : CLN3 (HMM E-Value=2.5) 28 7.6
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCEQRLSEYYKIKKS 375
VTC +C++ +++P + + C + L +G +L+C C+ +++ KS
Sbjct: 12 VTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQKFWNYVKS 69
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 33.5 bits (73), Expect = 0.15
Identities = 11/63 (17%), Positives = 31/63 (49%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCEQRLSEYYKIKKSYV 381
VTC +C++ +++P + C + L +G +L+C C+ ++ + ++
Sbjct: 13 VTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQKWIQTTSAFR 72
Query: 382 QKQ 390
+++
Sbjct: 73 KRK 75
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC LC++ +++P + + C + L +G +L+C C+
Sbjct: 13 VTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC LC++ +++P + + C + L +G +L+C C+
Sbjct: 13 VTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC LC++ +++P + + C + L +G +L+C C+
Sbjct: 133 VTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGKGKLVCPLCK 178
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 32.7 bits (71), Expect = 0.27
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHLNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC LC++ +++P + C + L +G +L+C C+
Sbjct: 13 VTCSLCIEHFNDPRVLPCFHSFCRHCLEELAVHSEGKGKLVCPLCK 58
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 31.9 bits (69), Expect = 0.47
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + + C + L +G +L+C C+
Sbjct: 18 VTCSICIEHFDDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCK 63
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + C + L +G +L+C C+
Sbjct: 12 VTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 57
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCEQRL 348
VTC LCLD +++P + K C + LV ++ C C +
Sbjct: 14 VTCLLCLDIFTDPRLLPCLHTYCKKCLEDLVSQCQKKGEIYCPQCRHEV 62
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCEQRLS--EYYKIKK 372
+TC +CL+ + +++P K C + + F G L+C TC + S E+ I+K
Sbjct: 20 LTCSVCLEQFREPKMLPCFHTFCKECLEKTKQSFRG--NLLCPTCRTKTSVTEHEMIQK 76
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P C + L +G +L+C C+
Sbjct: 13 VTCSICIEHFNDPRVLPCFHSFCLHCLEELAVHSEGRGKLVCPLCK 58
>SB_2309| Best HMM Match : Fasciclin (HMM E-Value=0)
Length = 503
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -2
Query: 373 ISLSCS-IPKVVAHMS-GILTEVSHQMVPREYQNKI*FVLELLEQFDT 236
++ CS I KV + S G+L E+S MVP Y N + FV E + F T
Sbjct: 48 VTAQCSLITKVNLNASNGVLHELSRVMVPPLYGNIVGFVREQPQHFST 95
>SB_32863| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-06)
Length = 309
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -3
Query: 258 NCWNNLILASIIQTKSTCNKQLWIDLYSTHFKDNFFVWVWLVAL 127
N +NL+L S+ +++ N W++L+ + D F W ++A+
Sbjct: 150 NKHSNLLLGSVYGSEAAMNCSDWLELFQSLLSDLSFSWDGMLAI 193
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
VTC +C++ +++P + + C + L E G +L+C C+
Sbjct: 13 VTCAICIEHFTDPRLLPCLHTFCRHCLEDLAE-HSGKGKLVCPLCK 57
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/46 (21%), Positives = 22/46 (47%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCE 339
V C +C++ +++P + C + L +G +L+C C+
Sbjct: 13 VRCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1867
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 288 NIKTKFNLFLNCWNNLILASIIQTKSTCNKQLWIDLYSTH 169
+ + KF LFL W NLIL +++ K+ C DLY H
Sbjct: 1565 SFRDKFPLFLMGW-NLILCALLLPKAACGD----DLYGVH 1599
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 433 IQSQQNDVTSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPWKNDSEVCESK 612
+Q +++D + E ENE + KK V + + +IS+S+ K KN++E+ E +
Sbjct: 1184 LQKERDDKAEDLY-EKENEVVVMKKRVKEFELLISNSNDSAAKDSLLKTVKNENEIQEKE 1242
>SB_36417| Best HMM Match : MFS_1 (HMM E-Value=0.0037)
Length = 547
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 439 SQQNDVTSSQFNEL--ENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
SQQ D+ SS+F +L ENE +I H + S S + V + W
Sbjct: 19 SQQEDICSSEFFDLLSENETEIQTSHTSPVSHLSPSQSISSNKLVPEGGW 68
>SB_53776| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.5e-12)
Length = 640
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 517 KRKRMISSSSSDCDPPVEKKPWKNDSEVC 603
+R+R S SS++C P +E K N+S C
Sbjct: 428 RRRRPGSQSSAECSPTLEAKGVMNNSSPC 456
>SB_37309| Best HMM Match : Toxin_29 (HMM E-Value=1.2)
Length = 754
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 273 FNLFLNCWNNLILASIIQTKSTCNK 199
+ F WNN + ++Q+ STC K
Sbjct: 280 YQTFFTTWNNKLPVDVLQSDSTCQK 304
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 202 VTCRLCLDDTGQYQIVPTVQEQIKFCFDILVEPFDGLPQLICQTCEQRL 348
VTC LCL+ +++ + + C + L E G + C C +++
Sbjct: 14 VTCCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQG-DSISCPQCREKI 61
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 505 KHVLKRKRMISSSSSDCDPPVEKKPWKNDSEVCESKKFGCRLCNCCFT 648
K +L ++ SSS P +K N E C FG C C T
Sbjct: 5 KVLLLAALLVVSSSGIKQDPCSEKTCSNQGEECVINSFGMAECRCTST 52
>SB_50828| Best HMM Match : IspA (HMM E-Value=0.88)
Length = 245
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 396 ICLFLYIGFLYLVVFRKSLLTCLAY 322
ICL+LY+GF S+LT LA+
Sbjct: 43 ICLYLYVGFFAFFFSGFSVLTTLAF 67
>SB_16151| Best HMM Match : CLN3 (HMM E-Value=2.5)
Length = 217
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 396 ICLFLYIGFLYLVVFRKSLLTCLAY 322
ICL+LY+GF S+LT LA+
Sbjct: 26 ICLYLYVGFFAFFFSGFSVLTTLAF 50
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,995,531
Number of Sequences: 59808
Number of extensions: 330084
Number of successful extensions: 793
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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