Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12d24f
(621 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 28 0.064
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.45
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.60
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.60
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.79
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 1.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 1.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.8
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 7.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 7.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 7.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 7.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 7.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 7.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 7.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 7.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 7.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.7
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 28.3 bits (60), Expect = 0.064
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y+ NN Y N KL+ N Y + +P+ C N
Sbjct: 96 YNNNNYNNYNYNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGN 139
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPVPVPVPIYCGN 131
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPVPVPVPIYCGN 131
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPVPVPVPIYCGN 131
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPVPVPVPIYCGN 131
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPVPVPVPIYCGN 131
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPVPVPVPIYCGN 131
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPVPVPVPIYCGN 131
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.0 bits (52), Expect = 0.60
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
Y+ N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 89 YNYSNYNNYNNNNN-YNNYKKLYYNINYIEQIPIPVPVPIYCGN 131
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.0 bits (52), Expect = 0.60
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQH 543
N Y++NN Y N + ++NN Y +
Sbjct: 327 NNYNNNN--YNNNYNNYNNNNYNNY 349
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 24.6 bits (51), Expect = 0.79
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 457 TKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGNL 558
+ L N Y+ NN YK + ++ Y ++Y N+
Sbjct: 316 SSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIINI 349
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
N Y++NN Y N KL+ N Y + +P+ C N
Sbjct: 94 NNYNNNN--YNNYKKLYYNINYIEQVPVPIPVPIYCGN 129
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFK-LFSNNRYRQHYRGNLPLYRSCSN 582
N Y++ N Y N +K L+ N Y + +P+ C N
Sbjct: 335 NNYNNYNNNYNNNYKKLYYNINYIEQIPVPVPVPIYCGN 373
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 451 YSTKLLNQYSSNNKLYKNTFKLFSNNRYRQHYRGN 555
Y N Y++N Y N ++NN + +Y N
Sbjct: 322 YKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNIN 356
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 475 YSSNNKLYKNTFKLFSNNRYRQHYRGN 555
+++NN Y ++NN Y +Y N
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNN 350
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 1.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 53 FVLRILVVAESVKSRKRSKQSTSERYSTESSVDPTTTAA 169
FV+ + VAE + R+R KQ YS S + T A
Sbjct: 29 FVVGLERVAEELMGRRRWKQYQDTLYSGTRSSESLTAQA 67
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 155 TTTAAGAKSNYSTATKSITTAVAATTESP 241
TTT + +T T + T +ATT P
Sbjct: 663 TTTTTTTTTTTTTTTPNTTQNASATTPPP 691
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 457 TKLLNQYS-SNNKLYKNTFKLFSNNRYRQHYR 549
+ L N Y SN Y N + NN Y +Y+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYK 114
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHYR 549
+ Y++ N Y N + NN Y++ Y+
Sbjct: 92 SNYNNYNNNYNNNYNNNYNNNYKKLYK 118
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 457 TKLLNQYS-SNNKLYKNTFKLFSNNRYRQHYR 549
+ L N Y SN Y N + NN Y +Y+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYK 114
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHYR 549
+ Y++ N Y N + NN Y++ Y+
Sbjct: 92 SNYNNYNNNYNNNYNNNYNNNYKKLYK 118
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHYR 549
N SNN Y N + ++NN Y +Y+
Sbjct: 85 NNSLSNNYNYNNNYNNYNNN-YNTNYK 110
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 481 SNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
SNN ++ N +K NN + N LY + N
Sbjct: 85 SNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIIN 118
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 481 SNNKLYKNTFKLFSNNRYRQHYRGNLPLYRSCSN 582
SNN ++ N +K NN + N LY + N
Sbjct: 85 SNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIIN 118
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 181 KLFNSNKVNYNSSCSNNRISSKLC 252
K+ +S NYN S NN +LC
Sbjct: 80 KIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 181 KLFNSNKVNYNSSCSNNRISSKLC 252
K+ +S NYN S NN +LC
Sbjct: 80 KIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 181 KLFNSNKVNYNSSCSNNRISSKLC 252
K+ +S NYN S NN +LC
Sbjct: 80 KIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 181 KLFNSNKVNYNSSCSNNRISSKLC 252
K+ +S NYN S NN +LC
Sbjct: 80 KIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 181 KLFNSNKVNYNSSCSNNRISSKLC 252
K+ +S NYN S NN +LC
Sbjct: 80 KIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 181 KLFNSNKVNYNSSCSNNRISSKLC 252
K+ +S NYN S NN +LC
Sbjct: 80 KIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNSLSNNYNYNNNYNNYNKHNYNKLY 110
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 318 NNSLSNNYNYNNNYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 318 NNSLSNNYNYNNNYNNYNKHNYNKLY 343
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 469 NQYSSNNKLYKNTFKLFSNNRYRQHY 546
N SNN Y N + ++ + Y + Y
Sbjct: 85 NNPLSNNYNYNNNYNNYNKHNYNKLY 110
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 203 SITTAVAATTESPAS 247
S TTA ATT +P S
Sbjct: 224 SYTTATMATTSTPGS 238
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,602
Number of Sequences: 438
Number of extensions: 1707
Number of successful extensions: 43
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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