Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12d08f
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061537-1|AAL29085.1|  127|Drosophila melanogaster LP01766p pro...    65   7e-11
AE013599-2917|AAF57541.2|  127|Drosophila melanogaster CG16926-P...    65   7e-11
BT024292-1|ABC86354.1|  261|Drosophila melanogaster IP13121p pro...    28   7.8  
BT022231-1|AAY54647.1|  133|Drosophila melanogaster IP12465p pro...    28   7.8  
AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA...    28   7.8  

>AY061537-1|AAL29085.1|  127|Drosophila melanogaster LP01766p
           protein.
          Length = 127

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 39/78 (50%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
 Frame = +2

Query: 203 KMSCIPPSAFTAGRIRETQRENR----DLKMPNVDMGKKPDKYFSFTNVEL-PVKYNSKF 367
           KM+ IP  AF A +IRE   E       L+    D G   D   + T  E  P KYN K 
Sbjct: 44  KMAAIPQGAFAACKIREQFNERELIIARLRSAAADKGSV-DNGNALTQREYSPNKYNDKL 102

Query: 368 MNSIWGKYNRYSPHNVKK 421
           MNSIWG YNRYSPHNVKK
Sbjct: 103 MNSIWGLYNRYSPHNVKK 120


>AE013599-2917|AAF57541.2|  127|Drosophila melanogaster CG16926-PA
           protein.
          Length = 127

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 39/78 (50%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
 Frame = +2

Query: 203 KMSCIPPSAFTAGRIRETQRENR----DLKMPNVDMGKKPDKYFSFTNVEL-PVKYNSKF 367
           KM+ IP  AF A +IRE   E       L+    D G   D   + T  E  P KYN K 
Sbjct: 44  KMAAIPQGAFAACKIREQFNERELIIARLRSAAADKGSV-DNGNALTQREYSPNKYNDKL 102

Query: 368 MNSIWGKYNRYSPHNVKK 421
           MNSIWG YNRYSPHNVKK
Sbjct: 103 MNSIWGLYNRYSPHNVKK 120


>BT024292-1|ABC86354.1|  261|Drosophila melanogaster IP13121p
           protein.
          Length = 261

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 326 N*NICQVSCPYQHWASSSHDFHVEFHGYAQ 237
           N N  Q   P+QH+ SSS+  H+E H + Q
Sbjct: 116 NSNHNQQHLPHQHYHSSSNIAHIEHHHHPQ 145


>BT022231-1|AAY54647.1|  133|Drosophila melanogaster IP12465p
           protein.
          Length = 133

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 152 VTLSKLIFELCKACELKKMSCIPPSAFTAGRIRETQ 259
           +T S+       +CELKK   +P +  T G + ETQ
Sbjct: 81  LTSSRSYCNFRNSCELKKSCSLPQADITKGSLTETQ 116


>AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA
           protein.
          Length = 819

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 326 N*NICQVSCPYQHWASSSHDFHVEFHGYAQ 237
           N N  Q   P+QH+ SSS+  H+E H + Q
Sbjct: 223 NSNHNQQHLPHQHYHSSSNIAHIEHHHHPQ 252


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,950,521
Number of Sequences: 53049
Number of extensions: 546435
Number of successful extensions: 1195
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)