Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f22f
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043706-5|ABP57808.1| 536|Caenorhabditis elegans Hypothetical ... 33 0.11
AF043706-3|ABP57807.1| 534|Caenorhabditis elegans Hypothetical ... 33 0.11
U12964-12|AAA91216.1| 362|Caenorhabditis elegans Hypothetical p... 31 0.80
Z69885-3|CAA93755.1| 278|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z92829-9|CAB07349.1| 360|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC006714-10|AAK29727.2| 253|Caenorhabditis elegans F-box a prot... 29 2.4
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 28 4.3
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 4.3
Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical pr... 28 5.7
U53336-8|AAA96180.2| 326|Caenorhabditis elegans Aurora/ipl1 rel... 27 7.5
AF071206-1|AAC70944.1| 326|Caenorhabditis elegans aurora/Ipl1-r... 27 7.5
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 27 7.5
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 27 9.9
U28737-3|AAA68273.1| 67|Caenorhabditis elegans Hypothetical pr... 27 9.9
U00044-1|AAY44001.1| 154|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 27 9.9
AC025726-10|AAK73915.3| 344|Caenorhabditis elegans Hypothetical... 27 9.9
AC024798-9|AAK29918.2| 640|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024776-22|AAK68478.3| 701|Caenorhabditis elegans Hypothetical... 27 9.9
>AF043706-5|ABP57808.1| 536|Caenorhabditis elegans Hypothetical
protein ZC123.4b protein.
Length = 536
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +3
Query: 186 NSEKISRIVNFIVQRVYTSFGTRSTRKWS*SRHTLRRSFNK 308
+SE + RI QR+ G+ STRK S S TLRRS NK
Sbjct: 44 SSENLHRITTMSPQRIQDVDGSPSTRKPSSSIFTLRRSRNK 84
>AF043706-3|ABP57807.1| 534|Caenorhabditis elegans Hypothetical
protein ZC123.4a protein.
Length = 534
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +3
Query: 186 NSEKISRIVNFIVQRVYTSFGTRSTRKWS*SRHTLRRSFNK 308
+SE + RI QR+ G+ STRK S S TLRRS NK
Sbjct: 44 SSENLHRITTMSPQRIQDVDGSPSTRKPSSSIFTLRRSRNK 84
>U12964-12|AAA91216.1| 362|Caenorhabditis elegans Hypothetical
protein F26F4.1 protein.
Length = 362
Score = 30.7 bits (66), Expect = 0.80
Identities = 44/175 (25%), Positives = 64/175 (36%), Gaps = 23/175 (13%)
Frame = +1
Query: 103 LDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQQGSGA-DL 279
L +L ++Y+A Q YRT R K E R++Q A D+
Sbjct: 6 LSRLSEFEKEKKFYDALQFYRTKVTRSFRLKNANEVAIPLVKHALEFFFREKQYQCAIDI 65
Query: 280 AILFVEVLTKSETKPNEEW-------VSKLAKLFEL---ISSSVPE------RETFLTNS 411
+ E L+K+ EE VSK A E+ +S PE R + +
Sbjct: 66 TTQYAECLSKNNVDLGEEAFNILADSVSKFANFAEIENEAGNSEPEQLLNTARCKCVDLA 125
Query: 412 IKWSMDN------NKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANML 558
I+W+ K G H +A+ A HFL S D ++AN L
Sbjct: 126 IQWTKQKATTPIEKKYGSAAFHTVLAKKLVAVDHVELAKNHFLLSDDFKSFANFL 180
>Z69885-3|CAA93755.1| 278|Caenorhabditis elegans Hypothetical
protein T04C10.3 protein.
Length = 278
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 289 FVEVLTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKI 468
F ++L K E + +L + F+L+ ++ + L +S+K ++ +KK +L KK+
Sbjct: 174 FTDLLQDFFQKRRVEKLRQLVEEFDLVLITMGNIYSQLNDSMKSDLEASKKQKTILDKKL 233
Query: 469 AEVFWKEKK 495
+++ K K
Sbjct: 234 SDLLQKTTK 242
>Z92829-9|CAB07349.1| 360|Caenorhabditis elegans Hypothetical
protein F10A3.13 protein.
Length = 360
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 547 HMLNHPMSVKSVYEQLCTFFPSKILLLFSCVGVG 446
+ L + +++++ L FFP+ L+LF GVG
Sbjct: 249 YQLFKTLLIQTIFPSLLVFFPAACLILFPAFGVG 282
>AC006714-10|AAK29727.2| 253|Caenorhabditis elegans F-box a protein
protein 21 protein.
Length = 253
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 463 KIAEVFWKEKKYTAAHRHFLHSSDGSAY 546
+I VFW E H +F+HS D S++
Sbjct: 204 EIVRVFWPEYNGNYHHNNFIHSFDSSSF 231
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = -1
Query: 500 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 321
+Y F N + LC+ + F+ +I H + R + + + + NSN++ +F ++
Sbjct: 209 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 268
Query: 320 LV 315
+V
Sbjct: 269 IV 270
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = -1
Query: 500 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 321
+Y F N + LC+ + F+ +I H + R + + + + NSN++ +F ++
Sbjct: 210 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 269
Query: 320 LV 315
+V
Sbjct: 270 IV 271
>Z92830-8|CAB07353.1| 537|Caenorhabditis elegans Hypothetical
protein F11A5.9 protein.
Length = 537
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 493 FFPSKILLLFSCVGVGHLFCCYPLTILL 410
+ PS+ LLFS V VG + YP+ +L+
Sbjct: 104 YSPSEKSLLFSLVAVGAMVAVYPVMLLI 131
>U53336-8|AAA96180.2| 326|Caenorhabditis elegans Aurora/ipl1
related kinase protein1 protein.
Length = 326
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 349 AKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKIAEVFWKEKKYT 501
A++ L S P+R WS+D+ G PL K VF +K T
Sbjct: 16 AEVISLTEDSRPQRVDQAREESCWSLDDFDVGRPLGKGKFGNVFISREKKT 66
>AF071206-1|AAC70944.1| 326|Caenorhabditis elegans
aurora/Ipl1-related protein kinase1 protein.
Length = 326
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 349 AKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKIAEVFWKEKKYT 501
A++ L S P+R WS+D+ G PL K VF +K T
Sbjct: 16 AEVISLTEDSRPQRVDQAREESCWSLDDFDVGRPLGKGKFGNVFISREKKT 66
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 419 HFIEFVRKVSRSGTLELINSNNFANFETHSSLGLV-SDFVKTSTKSMARS 273
H I+ V+ + TL L+ NN++ ET + +V S K T S+A S
Sbjct: 59 HLIKLKASVTYTQTLSLVKYNNYSQKETVKNSEVVYSSLQKVYTSSIALS 108
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +1
Query: 307 KSETKPNEEWVSKLAKLFELIS-----SSVPERETFLTNSIKWSMDNNKKGDPLLHKKIA 471
K PNE W S+L KL L++ VP+ + KW K P +K I
Sbjct: 1432 KEFESPNEAWYSRLTKLLLLMNKLQYQGMVPDPNSLQDRQQKW------KNKPQNYKAIV 1485
Query: 472 EVFWK 486
E F K
Sbjct: 1486 EDFKK 1490
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -1
Query: 401 RKVSR----SGTLELINSNNFANFETHSSLGLVSDFVKTSTKSMARSAPLP 261
+KVSR S +E +N N A+ SL VS K ST + P P
Sbjct: 909 KKVSRPPDMSQVIEEVNENPTASIHNSESLPKVSSLAKISTHTANSEPPTP 959
>U28737-3|AAA68273.1| 67|Caenorhabditis elegans Hypothetical
protein F14B8.2 protein.
Length = 67
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 43 SGNCNKNIMATRGERGVVRVLDKLEASINSGQ--YYEAHQMYRTL 171
S NC KN+ A + ER + V L N GQ Y ++YR +
Sbjct: 3 SKNCAKNLHACQWERDIALVFLGLMVLFNIGQVVYMNRARLYRLI 47
>U00044-1|AAY44001.1| 154|Caenorhabditis elegans Hypothetical
protein K04C2.8 protein.
Length = 154
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 104 NTLTTPLSPRVAMIFLLQFPDYSVFFR 24
NT TT + ++ M+F+LQ Y++FF+
Sbjct: 100 NTDTTIFNEKIDMVFVLQSFQYTMFFQ 126
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 27.1 bits (57), Expect = 9.9
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +1
Query: 307 KSETKPNEEWVSKLAKLFELIS-----SSVPERETFLTNSIKWSMDNNKKGDPLLHKKIA 471
K PNE W S+L KL L++ VP+ + KW K P +K I
Sbjct: 1432 KEFESPNEAWYSRLTKLLLLMNKLQYQGMVPDPNSLQDRQQKW------KNKPQNYKAIV 1485
Query: 472 EVFWK 486
E F K
Sbjct: 1486 EDFKK 1490
>AC025726-10|AAK73915.3| 344|Caenorhabditis elegans Hypothetical
protein Y71G12B.16 protein.
Length = 344
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 460 KKIAEVFWKEKKYTAAHRHFLHSS 531
K EV W++ Y HF+HSS
Sbjct: 136 KHSVEVLWQDDNYVEIALHFIHSS 159
>AC024798-9|AAK29918.2| 640|Caenorhabditis elegans Hypothetical
protein Y48G9A.3 protein.
Length = 640
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +1
Query: 274 DLAILFVEVLTKSE----TKPNEEWVSKLAKLFELISSSVPERETFLTNSIK 417
++A +FVE+ TKS+ +P + +V++++K F + P+ ET L ++K
Sbjct: 225 EIAPIFVEIFTKSQLLPKLRPPQFFVTRISK-FAVFLQKSPDFETNLLPNMK 275
>AC024776-22|AAK68478.3| 701|Caenorhabditis elegans Hypothetical
protein Y41D4B.4 protein.
Length = 701
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 403 TNSIKWSMDNNKKGDPLLHKKIAEVFWKEKKYTAA 507
T+S +W + +N++ D ++KIAE + K K+Y A
Sbjct: 57 TSSNRWIVPDNEQ-DFATYQKIAEFYEKTKRYAQA 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,867,835
Number of Sequences: 27780
Number of extensions: 291867
Number of successful extensions: 803
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -