Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12o08f
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p pro...    29   4.8  
AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA...    29   4.8  
AY118966-1|AAM50826.1|  604|Drosophila melanogaster LD44821p pro...    28   8.4  
AE014134-1460|AAN11163.1|  598|Drosophila melanogaster CG7795-PB...    28   8.4  
AE014134-1459|AAF52640.1|  643|Drosophila melanogaster CG7795-PA...    28   8.4  

>AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 212 AGSSVSAVWTPRSRTSCRFSRVFQQEYSSTPL 117
           +GS  S   +P +RTS R S V    YSS+PL
Sbjct: 396 SGSQSSQYGSPSARTSLRSSNVPYMPYSSSPL 427


>AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA
           protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -3

Query: 212 AGSSVSAVWTPRSRTSCRFSRVFQQEYSSTPL 117
           +GS  S   +P +RTS R S V    YSS+PL
Sbjct: 396 SGSQSSQYGSPSARTSLRSSNVPYMPYSSSPL 427


>AY118966-1|AAM50826.1|  604|Drosophila melanogaster LD44821p
           protein.
          Length = 604

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 459 WSTMGVPAMYRFADSKVG-AHRHCARCPSLDTISMRLALFM 340
           WS  G  A++       G AH HC    ++ T+S +LA FM
Sbjct: 47  WSMAGSSAVFIPGPIITGSAHGHCHHTATVSTVSPQLATFM 87


>AE014134-1460|AAN11163.1|  598|Drosophila melanogaster CG7795-PB,
           isoform B protein.
          Length = 598

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 459 WSTMGVPAMYRFADSKVG-AHRHCARCPSLDTISMRLALFM 340
           WS  G  A++       G AH HC    ++ T+S +LA FM
Sbjct: 47  WSMAGSSAVFIPGPIITGSAHGHCHHTATVSTVSPQLATFM 87


>AE014134-1459|AAF52640.1|  643|Drosophila melanogaster CG7795-PA,
           isoform A protein.
          Length = 643

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 459 WSTMGVPAMYRFADSKVG-AHRHCARCPSLDTISMRLALFM 340
           WS  G  A++       G AH HC    ++ T+S +LA FM
Sbjct: 47  WSMAGSSAVFIPGPIITGSAHGHCHHTATVSTVSPQLATFM 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,836,674
Number of Sequences: 53049
Number of extensions: 507884
Number of successful extensions: 1344
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)