Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i14r
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.8  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    24   4.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   9.5  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 145  DLTNTRNQTESIIKVLRKSKFTWYFRAIFMIT 50
            ++T  RN+   +   +RK +FT + R   +IT
Sbjct: 1108 EITAKRNEMRQLYDDVRKKRFTEFMRGFHIIT 1139


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = -3

Query: 349 EVPLLFETGKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRI 209
           E+P+L + G  L+  + I+  +CE +     LY  +     +   R+
Sbjct: 51  EIPVLDDDGFFLSESNAILQYLCEKYAPTSDLYPNDPKDRALVNHRL 97


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +2

Query: 401 HCALYPWMCDSIKFTSFFYIIKNNFAKF*SVNSSIREQN 517
           +C L+ +      F S +Y++   F +F  V   ++ Q+
Sbjct: 110 YCQLFTYTSGVSSFLSVWYVVAFTFERFIVVRYPLKRQS 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,025
Number of Sequences: 2352
Number of extensions: 13694
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)