Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i08r
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   6.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.2  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 649 LILLQKNPYFYLYECSQCFYFLFLINM*IILKM 551
           L L   NP F+L+ C   F F  +I M ++L++
Sbjct: 657 LRLRANNPGFWLFHCH--FLFHIVIGMNLVLQV 687


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 228 FCFCLFKYKLTK 193
           FC+C +  K+TK
Sbjct: 272 FCYCYYNSKMTK 283


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 650 FS*NRAMFFFSKAQNLCTFSAII 718
           F+   + F  SKA++ CTF A +
Sbjct: 28  FNHRESYFRLSKAKSFCTFVAAL 50


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 401 YKTWSNKKKQL 369
           Y TWS K KQ+
Sbjct: 150 YSTWSKKSKQV 160


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 401 YKTWSNKKKQL 369
           Y TWS K KQ+
Sbjct: 150 YSTWSKKSKQV 160


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 371 LNIEIYSSSHNSYPIAKISCRYLRECG 291
           LN   YS   N YP  +      R+CG
Sbjct: 245 LNEYFYSHLSNPYPSEEAKEELARKCG 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,327
Number of Sequences: 336
Number of extensions: 3887
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)