Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i08f
         (581 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IEH5 Cluster: Putative uncharacterized protein MAL13P...    35   1.2  
UniRef50_A6H651 Cluster: 1700019O17Rik protein; n=6; Murinae|Rep...    33   3.7  
UniRef50_P46764 Cluster: Mitochondrial 60S ribosomal protein L5;...    33   4.9  
UniRef50_Q8IB76 Cluster: Putative uncharacterized protein MAL8P1...    33   6.5  

>UniRef50_Q8IEH5 Cluster: Putative uncharacterized protein MAL13P1.70;
            n=5; cellular organisms|Rep: Putative uncharacterized
            protein MAL13P1.70 - Plasmodium falciparum (isolate 3D7)
          Length = 3377

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 15/58 (25%), Positives = 34/58 (58%)
 Frame = -3

Query: 321  LFTYLLKIKNKNTGYIRKDKNMDFFVTVSI*LKQSYVFFFKSTEFMYLFSHNFFIKTL 148
            +F+Y++K+    + YI K+KN D ++ +SI +K   + + K  ++   F+   ++K +
Sbjct: 1691 IFSYIMKLYETYSSYIIKEKNTDLYIFISILIKNVTLSYHK-LKYTNCFNRKKYLKKI 1747


>UniRef50_A6H651 Cluster: 1700019O17Rik protein; n=6; Murinae|Rep:
           1700019O17Rik protein - Mus musculus (Mouse)
          Length = 500

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -1

Query: 128 LYIVTSLLRHTRHTFSSGISVNTGYLNTSVSYSVISVETRKL 3
           L  V SLLR  R  FSSG+   TG    SV++ + SVE R +
Sbjct: 433 LRTVASLLRSARSAFSSGVMSGTGSALHSVTHLLESVERRTM 474


>UniRef50_P46764 Cluster: Mitochondrial 60S ribosomal protein L5;
           n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
           ribosomal protein L5 - Acanthamoeba castellanii (Amoeba)
          Length = 177

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 300 IKNKNTGYIRKDKNMDFFVTVSI*LKQSYVFFFKSTEFMYLFSHNFFIKTL 148
           IK     YI+K     FF++VS+  K S+ FF     F   F H ++ K L
Sbjct: 67  IKKVKFSYIKKKILKRFFISVSLNKKNSFNFFMYMLNFYNYFFHIYYQKCL 117


>UniRef50_Q8IB76 Cluster: Putative uncharacterized protein
           MAL8P1.34; n=3; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.34 - Plasmodium falciparum (isolate 3D7)
          Length = 1165

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -1

Query: 548 MNYVKNYKFQCLTAFFCWTMSCMMSR*LYLSKSNH-YIFVFMYIFVF 411
           M+  K+YK+  +  FF   MSC+    +Y+    + YI++F+Y+F++
Sbjct: 1   MSSAKSYKWVIIIFFFFKFMSCVNISDIYIYIYIYIYIYIFIYLFIY 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,083,422
Number of Sequences: 1657284
Number of extensions: 9063904
Number of successful extensions: 23065
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23040
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)