Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12i07r
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    25   3.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.8  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   7.7  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 460 WLKYRKEKERLRVMVQVNTSGEQAKSGLEPL 368
           WL Y K+ + L++    N    +A +GL PL
Sbjct: 156 WLGYNKKTKLLQIAACPNQDPLEATTGLVPL 186


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 292  QYDYDITKGPNPDYLCLIKCRQEVCEKLNLDIKDVELSMGMSSDFAHAIE 143
            Q + DI   PN      I+ R E  EK+N +++  EL   ++S    AI+
Sbjct: 1013 QIEQDIRDQPNAPEEEKIRYRNESYEKINSELQ--ELYRNITSQIPFAID 1060


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 292  QYDYDITKGPNPDYLCLIKCRQEVCEKLNLDIKDVELSMGMSSDFAHAIE 143
            Q + DI   PN      I+ R E  EK+N +++  EL   ++S    AI+
Sbjct: 1014 QIEQDIRDQPNAPEEEKIRYRNESYEKINSELQ--ELYRNITSQIPFAID 1061


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 318 SRFGQFSRMCSTAFVVSNGSKPLFACSPLVLTC 416
           +RF Q + + +   +   G+KP+F C     TC
Sbjct: 275 ARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTC 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,402
Number of Sequences: 2352
Number of extensions: 15173
Number of successful extensions: 58
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)