Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12h15f
         (611 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q00TJ1 Cluster: Transducin family protein / WD-40 repea...    33   4.0  
UniRef50_A7SQE0 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.1  
UniRef50_Q757T4 Cluster: AEL072Wp; n=1; Eremothecium gossypii|Re...    32   9.3  

>UniRef50_Q00TJ1 Cluster: Transducin family protein / WD-40 repeat
           family protein; n=2; Ostreococcus|Rep: Transducin family
           protein / WD-40 repeat family protein - Ostreococcus
           tauri
          Length = 836

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 320 CILTTNCNAPVPTPVPAIMLIGNSRPVVIPETRVSNI 210
           CI+T     P P+P P + ++  S P++ PE  V+++
Sbjct: 626 CIITRTSAGPTPSPRPVLSMLPLSVPIITPEQSVTDL 662


>UniRef50_A7SQE0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 178

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 20/49 (40%), Positives = 28/49 (57%)
 Frame = +1

Query: 130 SKMMNYTIIMTVTLLLLCCASSAPTPRIFETLVSGITTGLELPMSIIAG 276
           S + N T+I   T +L C A+ +PTP  F  L SG +  +   MS+IAG
Sbjct: 3   SLVHNLTLIAGETAVLQCTAAGSPTP-YFRWLKSGKSLTMGGRMSVIAG 50


>UniRef50_Q757T4 Cluster: AEL072Wp; n=1; Eremothecium gossypii|Rep:
            AEL072Wp - Ashbya gossypii (Yeast) (Eremothecium
            gossypii)
          Length = 1138

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -3

Query: 462  MNLFQIYIHFSAD*EVL*SSTNNLTRHCIFYIYSLVSKHFYITHTVCMYI 313
            +N+   +  +    EV  SST  L+   +F+ Y L ++H  +T T+C Y+
Sbjct: 962  LNISICHSDYPGQDEVFVSSTQLLSSVLLFHRYKLSNRHHLVTSTLCCYM 1011


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,623,373
Number of Sequences: 1657284
Number of extensions: 10334879
Number of successful extensions: 26518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26466
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)