Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12g21f
(524 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212; Euka... 208 8e-53
UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2; ... 156 3e-37
UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8; Ascomy... 148 9e-35
UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal ... 144 8e-34
UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-pro... 134 1e-30
UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins contai... 120 2e-26
UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253, w... 113 3e-24
UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal ... 111 1e-23
UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamo... 103 3e-21
UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomona... 103 3e-21
UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n... 97 2e-19
UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia in... 96 5e-19
UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal ... 93 3e-18
UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiell... 90 3e-17
UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;... 89 8e-17
UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n... 70 4e-11
UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal ... 64 2e-09
UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1; Antono... 47 3e-04
UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5; Sulfolo... 44 0.002
UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1; Enceph... 42 0.011
UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3; Archaea... 42 0.011
UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza sativa... 40 0.026
UniRef50_A7D0Q4 Cluster: Ribosomal protein L1; n=1; Halorubrum l... 40 0.035
UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1... 35 1.00
UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA... 35 1.00
UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8; Alphapro... 35 1.00
UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7; Bacteria... 35 1.3
UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7; Archaea... 34 2.3
UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone NT2RP70... 33 3.0
UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis thaliana|... 33 3.0
UniRef50_A4R562 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=... 33 4.0
UniRef50_P13575 Cluster: 50S ribosomal protein L1P; n=5; Euryarc... 33 4.0
UniRef50_A3XWB4 Cluster: Putative uncharacterized protein; n=3; ... 32 7.0
UniRef50_Q97BN2 Cluster: 50S ribosomal protein L1P; n=4; Thermop... 32 9.3
>UniRef50_P62906 Cluster: 60S ribosomal protein L10a; n=212;
Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens
(Human)
Length = 217
Score = 208 bits (507), Expect = 8e-53
Identities = 101/158 (63%), Positives = 112/158 (70%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 229
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 230 PKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQI 409
PK VCVLGDQQHCDEAK +++P M SESLIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQ
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQ 158
>UniRef50_A2WX71 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 238
Score = 156 bits (379), Expect = 3e-37
Identities = 82/178 (46%), Positives = 107/178 (60%), Gaps = 22/178 (12%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 416 LLGPGLNKA----------------------GKFPGLLSHQESMTQKIDEVKGTIKFQ 523
LLGPGLNKA GKFP L++HQES+ K++E K T+KFQ
Sbjct: 122 LLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQ 179
>UniRef50_Q9UVJ4 Cluster: 60S ribosomal protein L10a; n=8;
Ascomycota|Rep: 60S ribosomal protein L10a - Candida
albicans (Yeast)
Length = 217
Score = 148 bits (358), Expect = 9e-35
Identities = 76/157 (48%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
SK++ + E V+ +L+ S++ KKRNFLETVELQ+GLKNYDPQ+DKRFSGT+KL +PRP
Sbjct: 2 SKITSSGVREYVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPRP 61
Query: 233 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 412
M C+ GD D AK+L V M SE LIKQIP
Sbjct: 62 NMTTCIFGDAFDFDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIP 121
Query: 413 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
RLLG L+KAG+FP +SH + + K+ +VK TIKFQ
Sbjct: 122 RLLGRTLSKAGQFPTPVSHNDDLYSKVTDVKSTIKFQ 158
>UniRef50_UPI00005A03AD Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 303
Score = 144 bits (350), Expect = 8e-34
Identities = 76/149 (51%), Positives = 91/149 (61%)
Frame = +2
Query: 5 LQLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK 184
L+L V++ G ++ + S T VL ++ K+R FLETVELQI LKNYDPQK
Sbjct: 152 LELEGVMLRGVSQSEKDTAKSPATPCRRRYEVLHGNQRKRRKFLETVELQITLKNYDPQK 211
Query: 185 DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXX 364
DKRFSGTV+LK P PK VCV+GDQQHCDEAK +++P M
Sbjct: 212 DKRFSGTVRLKSTPCPKFSVCVVGDQQHCDEAKAVDIPHMDIEMLKKLNKNKKLVKKLAK 271
Query: 365 XXXXXXXSESLIKQIPRLLGPGLNKAGKF 451
SESLIKQIPR+LGPGLNKAGKF
Sbjct: 272 KYDAFLASESLIKQIPRILGPGLNKAGKF 300
>UniRef50_UPI0000E49458 Cluster: PREDICTED: similar to Rpl10a-prov
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Rpl10a-prov
protein, partial - Strongylocentrotus purpuratus
Length = 155
Score = 134 bits (324), Expect = 1e-30
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +2
Query: 59 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 238
KVSRD LYE V V SK+KKR FLET+ELQ+ LKNYDPQKDKRFSGTVKL++IPRPK
Sbjct: 1 KVSRDLLYEAVKEVQNGSKEKKRKFLETIELQVNLKNYDPQKDKRFSGTVKLRHIPRPKF 60
Query: 239 QVCVLGDQQHCDEAKTLNVPCM 304
+C+LGDQQH DEAK +PCM
Sbjct: 61 SMCILGDQQHLDEAKANGIPCM 82
>UniRef50_Q22UX9 Cluster: L1P family of ribosomal proteins
containing protein; n=9; Eukaryota|Rep: L1P family of
ribosomal proteins containing protein - Tetrahymena
thermophila SB210
Length = 215
Score = 120 bits (289), Expect = 2e-26
Identities = 59/156 (37%), Positives = 91/156 (58%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SK+S + L + +L S KKR F ETVELQIGL++Y+P KDKRF+G++KL +P P
Sbjct: 2 SKISSEFLKNTITQML--SDRKKREFTETVELQIGLRDYNPDKDKRFTGSIKLPNMPYPN 59
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
++ ++G +HC+EAK + C+ SE+L+KQ+P+
Sbjct: 60 KKIAIIGTMRHCEEAKAAGIACIDTEGLKKFNKEPKLIKKWFKPYDTLLCSETLMKQLPK 119
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
L G L+K GKFP ++ ES+ K+ E++ T++FQ
Sbjct: 120 LCGNVLSKIGKFPISITEGESVVAKVKELQSTVRFQ 155
>UniRef50_A0CRX7 Cluster: Chromosome undetermined scaffold_253,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_253,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 113 bits (271), Expect = 3e-24
Identities = 60/156 (38%), Positives = 90/156 (57%)
Frame = +2
Query: 56 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
SK+ + L + ++ +L ++ KKRNF ET ELQI L++YD QKDKRF G+ +L + P P
Sbjct: 26 SKLQGEQLKKYIHEML--TERKKRNFKETTELQIQLRDYDVQKDKRFQGSTRLLHAPYPN 83
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
+++ V+G+ HCD+AK L + + SESL+K IPR
Sbjct: 84 IKIGVIGNLTHCDQAKALGLTAIDQDGLKKFNKEKKPIKKWCKPFDILIASESLMKVIPR 143
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
L+G K GKFP + ES++ K++EVK ++KFQ
Sbjct: 144 LVGNVFTKIGKFPIAIPETESVSSKVNEVKSSVKFQ 179
>UniRef50_UPI00005A509E Cluster: PREDICTED: similar to ribosomal
protein L10a; n=2; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 268
Score = 111 bits (266), Expect = 1e-23
Identities = 58/127 (45%), Positives = 73/127 (57%)
Frame = +2
Query: 143 VELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCMXXXXXX 322
V LQI L+N D Q D+RFSGT++LK+ PR K +CVLGDQQHCDEAK + +P M
Sbjct: 13 VLLQISLQNSDSQTDRRFSGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRMNTEALK 72
Query: 323 XXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEV 502
ESL+ QI LGP LNKAGKFP +H +++ K+D+V
Sbjct: 73 KLNKNKKLFKKLAKKFDAFLALESLVLQI---LGPDLNKAGKFPSSKTHVKNIVAKMDDV 129
Query: 503 KGTIKFQ 523
K IK Q
Sbjct: 130 KFMIKLQ 136
>UniRef50_O15613 Cluster: 60S ribosomal protein L10a; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L10a - Entamoeba
histolytica
Length = 165
Score = 103 bits (247), Expect = 3e-21
Identities = 60/157 (38%), Positives = 83/157 (52%)
Frame = +2
Query: 53 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
SS VSR + V +L+ K++K F ET EL + LKNYDP KDKR GT KL + +
Sbjct: 1 SSAVSR----QGVATILKEKKERK--FGETGELHLALKNYDPDKDKRCGGTDKLPNVTKA 54
Query: 233 KMQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIP 412
+VCVLGD Q C+ A+ N+P M S+S+ +Q+
Sbjct: 55 NYKVCVLGDAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQ 114
Query: 413 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
++LGPGLNK GKFP L E + KI+E++ + Q
Sbjct: 115 KILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQ 151
>UniRef50_A2F0R8 Cluster: Ribosomal protein L10a; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L10a - Trichomonas
vaginalis G3
Length = 215
Score = 103 bits (246), Expect = 3e-21
Identities = 52/148 (35%), Positives = 84/148 (56%)
Frame = +2
Query: 68 RDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVC 247
++TL + + VL+ +K KKR FLETV++Q+ LK Y+ KDKRF G++KL +I RP +++
Sbjct: 6 QETLQKAIKDVLEGAKTKKRGFLETVDIQLKLKGYNVSKDKRFVGSIKLPHIIRPNVRIG 65
Query: 248 VLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP 427
VLG++ HC+EA+ LN+P S +I Q+ ++LG
Sbjct: 66 VLGNKVHCEEAQKLNIPAYDLPTLTNFNKEKKVVKAWTKRHHLFLASPDVIGQVNKVLGQ 125
Query: 428 GLNKAGKFPGLLSHQESMTQKIDEVKGT 511
+A KFP + +++ + +DEVK T
Sbjct: 126 VYTRANKFPTNIK-TDTVAKVVDEVKRT 152
>UniRef50_Q01AT5 Cluster: Chromosome 04 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 04 contig 1, DNA
sequence - Ostreococcus tauri
Length = 175
Score = 97.1 bits (231), Expect = 2e-19
Identities = 55/117 (47%), Positives = 60/117 (51%)
Frame = -3
Query: 522 WNLMVPLTSSIFCVMDSWWERRPGNLPALFKPGPNKRGICLISDSDARKXXXXXXXXXXX 343
WNL+ LTS I DS GNLPALFKPGP +RGICLI+DSDARK
Sbjct: 59 WNLIWDLTSLILLSRDSLCVASVGNLPALFKPGPKRRGICLITDSDARKCWYFFASFLMS 118
Query: 342 XXXXXXXXXXXXSIHGTFKVLASSQCCWSPRTQTCIFGRGMYFSFTVPEKRLSFCGS 172
S+ ASSQC SP FGRG+ TVP KRLSFCGS
Sbjct: 119 FLFLLSFLSASTSMESMPLPAASSQCLASPSMHILSFGRGITGRLTVPLKRLSFCGS 175
>UniRef50_Q76KS4 Cluster: Ribosomal protein L10a; n=2; Giardia
intestinalis|Rep: Ribosomal protein L10a - Giardia
lamblia (Giardia intestinalis)
Length = 221
Score = 95.9 bits (228), Expect = 5e-19
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Frame = +2
Query: 59 KVSRDTLYECVNAVLQ-SSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 235
+++ + L + + +++ ++ +K R FLETVELQ+GLK YDP+KD RF+ + L +I +
Sbjct: 7 RINPEALNKHIAEIIERATNEKPRKFLETVELQVGLKGYDPKKDPRFNLPLVLPHIAKQN 66
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
+++CV+ D + D AK L + + S+SLI+QI
Sbjct: 67 LKLCVIADARDADRAKKLGLNYVEIEHLQQFNKDAKQIKKFAKSYDVFLASKSLIRQITV 126
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
GPG KAG+ P L+ E + K+ E K TIK Q
Sbjct: 127 YAGPGFTKAGRTPLPLAPDEDLELKVLECKSTIKVQ 162
>UniRef50_UPI00005A268C Cluster: PREDICTED: similar to ribosomal
protein L10a isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a isoform 4 -
Canis familiaris
Length = 105
Score = 93.5 bits (222), Expect = 3e-18
Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 50 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKL-KYIP 226
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+L + P
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLAPFCP 60
Query: 227 RPKMQVCVLGDQQHCD-----EAKTLNVPC 301
P ++ G + A+ + PC
Sbjct: 61 HPALRALPPGPPVELEAGGHGRARAVQTPC 90
>UniRef50_Q3LW91 Cluster: Ribosomal protein 10a; n=1; Bigelowiella
natans|Rep: Ribosomal protein 10a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 216
Score = 89.8 bits (213), Expect = 3e-17
Identities = 50/134 (37%), Positives = 71/134 (52%)
Frame = +2
Query: 116 DKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNV 295
+KKRNF+E VEL LK+ + +K K+ SG VKL + PR +++C+L DQ+H EAK L +
Sbjct: 22 NKKRNFIEKVELNFSLKSINFKKHKKISGGVKLPFGPRRAVKICMLADQRHITEAKNLGL 81
Query: 296 PCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGKFPGLLSHQE 475
+ SESLIK IPR LGP L K GKFP ++
Sbjct: 82 YYLDINQIKLLKNKKKVLKKLVKKFEVFIASESLIKIIPRYLGPALAKVGKFPFSITSTI 141
Query: 476 SMTQKIDEVKGTIK 517
+T++I + +K
Sbjct: 142 PITEQIKLILKEVK 155
>UniRef50_Q018L4 Cluster: RL10A_CHLRE 60S ribosomal protein L10a;
n=1; Ostreococcus tauri|Rep: RL10A_CHLRE 60S ribosomal
protein L10a - Ostreococcus tauri
Length = 134
Score = 88.6 bits (210), Expect = 8e-17
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +2
Query: 53 SSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRP 232
S K++ DTL E V+ +L+ SK+K R F+ETVELQIGLKNYDPQKDKRF+GTV L IPRP
Sbjct: 74 SGKLNTDTLKEGVSFILEKSKEKPRKFVETVELQIGLKNYDPQKDKRFNGTVNLPVIPRP 133
>UniRef50_UPI0000F33BDC Cluster: UPI0000F33BDC related cluster; n=1;
Bos taurus|Rep: UPI0000F33BDC UniRef100 entry - Bos
Taurus
Length = 172
Score = 69.7 bits (163), Expect = 4e-11
Identities = 49/130 (37%), Positives = 66/130 (50%)
Frame = -2
Query: 523 LELNGSLDFINLLRHGLLVGEKTREFTSFVQTGTQQTGNLLDQ*L*CQESIKFFGQFLDK 344
LEL+G L IN L+VG++ RE VQ Q + +LLDQ L ++ I GQ LD+
Sbjct: 46 LELDGGLHLINFGHRVLIVGQQGRELARLVQAWAQDSWDLLDQRLGSRKGIILLGQLLDQ 105
Query: 343 LFVLIQFFQSLSIHTWHIQGFSLVTMLLVSKNANLHFRPRYVF*LYSAGETLVLLWVIVL 164
VL++F Q H I T+LLV ++ + F A E VLL VI L
Sbjct: 106 FLVLVEFPQ---CHVGDIHSLGFFTVLLVPQDTHGEFGAGSGLKPDGAQEIFVLLRVIGL 162
Query: 163 QTNLKLYSLQ 134
Q +LK + LQ
Sbjct: 163 QADLKHHHLQ 172
>UniRef50_UPI00005A4EEC Cluster: PREDICTED: similar to ribosomal
protein L10a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L10a - Canis
familiaris
Length = 205
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +2
Query: 410 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
P++L PGLNKAGKFP LL+H E+M K+DEVK TIKFQ
Sbjct: 110 PQILDPGLNKAGKFPSLLTHSENMVAKVDEVKSTIKFQ 147
Score = 53.2 bits (122), Expect = 4e-06
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 50 MSSKVSRDTLYEC-VNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIP 226
M +K S +C V VLQ ++ K LE VELQI LK YD KD+ F GT++LK P
Sbjct: 25 MGAKKSLRQQCDCGVREVLQGNQPKNWQCLERVELQISLKKYDAVKDRHFLGTIRLKSTP 84
Query: 227 RP 232
P
Sbjct: 85 SP 86
>UniRef50_Q6E4P9 Cluster: 60S ribosomal protein L10a; n=1;
Antonospora locustae|Rep: 60S ribosomal protein L10a -
Antonospora locustae (Nosema locustae)
Length = 211
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +2
Query: 137 ETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 298
ET+E+Q+ LK YD ++DK+F G+V L + R +V V+GD+ + AK +P
Sbjct: 25 ETMEVQVCLKGYDLKRDKKFDGSVVLPFQKRKNERVLVVGDRNLEEMAKEAGLP 78
>UniRef50_Q971J1 Cluster: 50S ribosomal protein L1P; n=5;
Sulfolobaceae|Rep: 50S ribosomal protein L1P -
Sulfolobus tokodaii
Length = 222
Score = 44.4 bits (100), Expect = 0.002
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Frame = +2
Query: 65 SRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQ 241
S+D+L E + L + KRNF ++VEL + K D +K + + V L P +
Sbjct: 7 SKDSLVEALKVALNPENNPKRNFTQSVELIVTFKGIDMKKGELKLREIVPLPKEPSKPRK 66
Query: 242 VCVLGDQQHCDEAKTL--NVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 415
V V+ Q + AK NV + ++ + + R
Sbjct: 67 VLVIPAFQQIESAKKAEPNV-LLTKEELQKLQGQKRAIKKLARQNDWFLVAQDSMALVGR 125
Query: 416 LLGPGLNKAGKFPGLLSHQESMTQKI 493
+LGP L GKFP L + +T+ I
Sbjct: 126 ILGPALGPRGKFPTPLPNAADITEYI 151
>UniRef50_Q8SRY5 Cluster: 60S RIBOSOMAL PROTEIN L10A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L10A
- Encephalitozoon cuniculi
Length = 219
Score = 41.5 bits (93), Expect = 0.011
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +2
Query: 101 LQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEA 280
L+ S+D ++ + T+++Q+ LK +DP+KD + S + L Y R + V+ D+ H
Sbjct: 25 LKESEDPEK--IVTIQIQVNLKGFDPRKDNKVSKDMVLPYRVRSLDKTIVIADEAHVKVC 82
Query: 281 KTLNVP 298
N+P
Sbjct: 83 IDANLP 88
>UniRef50_O28782 Cluster: 50S ribosomal protein L1P; n=3;
Archaea|Rep: 50S ribosomal protein L1P - Archaeoglobus
fulgidus
Length = 215
Score = 41.5 bits (93), Expect = 0.011
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Frame = +2
Query: 62 VSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKY-IPRPK 235
V +D L + + +++ K KR F+ETVE+ + L+N D +K + R V L + + +P+
Sbjct: 3 VDKDKLVKSIEEAIKNGK--KRRFVETVEMAVNLRNVDMKKPENRIDTVVNLPHGLGKPR 60
Query: 236 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSES-LIKQIP 412
++ V +AK + +E+ L+ +I
Sbjct: 61 -KIGVFAKGDTALKAKEAGADVVITPEEIDELAKDKRRAKKLANSIDFFIAEAPLMPEIG 119
Query: 413 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
R LGP L GK P + ID ++ ++K +
Sbjct: 120 RKLGPVLGPRGKIPQPIPPLADPKPFIDRLRNSVKIR 156
>UniRef50_A3BCJ7 Cluster: Ribosomal protein L1; n=5; Oryza
sativa|Rep: Ribosomal protein L1 - Oryza sativa subsp.
japonica (Rice)
Length = 392
Score = 40.3 bits (90), Expect = 0.026
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 47 KMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYI 223
K KV+ D L + + + S+ +KKRNF ETVE + L DP++ D+ G + L +
Sbjct: 177 KRPQKVAID-LVDAIREIKTSANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHG 234
Query: 224 PRPKMQVCVLGDQQHCDEAK 283
++V V + DEA+
Sbjct: 235 TGKTVRVAVFAEGPAADEAR 254
>UniRef50_A7D0Q4 Cluster: Ribosomal protein L1; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L1 -
Halorubrum lacusprofundi ATCC 49239
Length = 238
Score = 39.9 bits (89), Expect = 0.035
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 1/152 (0%)
Frame = +2
Query: 71 DTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYD-PQKDKRFSGTVKLKYIPRPKMQVC 247
DT+ E V L + + RNF ETV++ I L++ D R +V L + Q+
Sbjct: 29 DTIQEAVTLALDDAPE--RNFRETVDIAINLRDLDLNDPSNRIDESVVLPAGTGQETQIV 86
Query: 248 VLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP 427
V + + A+ + + +L++ I R LG
Sbjct: 87 VFAEGETAVRAQEVADQVLDSDDLEDLGDDDDRAKDLADETDFFVAEANLMQDIGRYLGT 146
Query: 428 GLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 523
L GK P L + + ++ +K T++ +
Sbjct: 147 VLGPRGKMPTPLQPDDDIVDTVNRMKNTVQLR 178
>UniRef50_Q0AYI8 Cluster: Translation initiation factor IF-2; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Translation initiation factor IF-2 - Syntrophomonas
wolfei subsp. wolfei (strain Goettingen)
Length = 882
Score = 35.1 bits (77), Expect = 1.00
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 17 SVVIGGSLTNKMSSKVSRD--TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK 190
S VI G + S +V RD +YE + L+ KD + +E E IG+K+++ K+
Sbjct: 808 SYVIDGKIQRNASVRVLRDGVIVYEGQLSSLKRFKDDAKEVVENYECGIGIKDFNDVKEG 867
Query: 191 RFSGTVKLKYIPR 229
L+ IPR
Sbjct: 868 DIIEAYTLEEIPR 880
>UniRef50_A2Y3N8 Cluster: DNA primase; n=4; Oryza sativa|Rep: DNA
primase - Oryza sativa subsp. indica (Rice)
Length = 397
Score = 35.1 bits (77), Expect = 1.00
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 32 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 208
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 209 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 304
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>UniRef50_Q92J89 Cluster: 50S ribosomal protein L1; n=8;
Alphaproteobacteria|Rep: 50S ribosomal protein L1 -
Rickettsia conorii
Length = 239
Score = 35.1 bits (77), Expect = 1.00
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +2
Query: 23 VIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSG 202
+ GG + KV DTLY NAV + F T+E+ + L D+ G
Sbjct: 11 ISGGKKIREAREKVKSDTLYNLTNAVERLKSASYVKFDPTLEIVMKLGIDSRHSDQMVRG 70
Query: 203 TVKLKYIPRPKMQVCVLGDQQHCDEAKT 286
V L ++V V+ ++ +EAK+
Sbjct: 71 VVNLPAGTGKTVRVAVICKEEREEEAKS 98
>UniRef50_Q9ZE23 Cluster: 50S ribosomal protein L1; n=7;
Bacteria|Rep: 50S ribosomal protein L1 - Rickettsia
prowazekii
Length = 238
Score = 34.7 bits (76), Expect = 1.3
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 23 VIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQ-KDKRFS 199
+ G + KV DTLY NAV Q F T+E+ + L DP+ D+
Sbjct: 10 ISGSKKIREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKL-GIDPRHSDQIVR 68
Query: 200 GTVKLKYIPRPKMQVCVLGDQQHCDEAKT 286
G V L ++V V+ ++ +EAK+
Sbjct: 69 GVVNLPAGTGKTIRVAVICKEEREEEAKS 97
>UniRef50_Q8PY52 Cluster: 50S ribosomal protein L1P; n=7;
Archaea|Rep: 50S ribosomal protein L1P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 213
Score = 33.9 bits (74), Expect = 2.3
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 74 TLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK 190
T+ E V V++ S KRNF E+V+L I LKN D + K
Sbjct: 5 TILEAVKKVIEESP--KRNFSESVDLAINLKNLDMNQPK 41
>UniRef50_UPI0000ECD0EF Cluster: CDNA FLJ31980 fis, clone
NT2RP7008487, weakly similar to TRICHOHYALIN.; n=3;
Amniota|Rep: CDNA FLJ31980 fis, clone NT2RP7008487,
weakly similar to TRICHOHYALIN. - Gallus gallus
Length = 955
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/99 (23%), Positives = 47/99 (47%)
Frame = +2
Query: 8 QLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKD 187
QL +V SL K++ ++ + +Q KDK+ L+ +ELQ+ + + Q++
Sbjct: 322 QLAILVERDSLNQKLNERIFEKKQQQETLIYMQGEKDKELRNLKKMELQMKMIHESLQQE 381
Query: 188 KRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 304
K T+KL+ PK+ +L ++ + + C+
Sbjct: 382 KSQHKTLKLEAEAIPKINGVLLERRRELQKEIEMKKRCL 420
>UniRef50_Q9FJ26 Cluster: DNA primase; n=1; Arabidopsis
thaliana|Rep: DNA primase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 407
Score = 33.5 bits (73), Expect = 3.0
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +2
Query: 35 SLTNKMSSKVSRDTLYECVNAVLQSSKDKK---RNFLETVELQIGLKNYDPQKDKRFSGT 205
S + +S + + +E + LQS ++K R +E + D + K+ +
Sbjct: 275 SARSSLSEEATSLLRWEQLKKALQSKRNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHL 334
Query: 206 VKLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 304
+K + PK +VCV D +CDE L VP +
Sbjct: 335 LKAPFCVHPKTGRVCVPIDPNNCDEFDPLAVPTL 368
>UniRef50_A4R562 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1430
Score = 33.5 bits (73), Expect = 3.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 488 SASWTPGGREDQGIYQLCSNRDPTNGESA*SVTLM 384
+A+W PGG DQ + + + DP N +A T++
Sbjct: 422 TATWQPGGAHDQQVLDILKDIDPVNARAAMDTTML 456
>UniRef50_Q5QZU9 Cluster: Methyl-accepting chemotaxis protein; n=1;
Idiomarina loihiensis|Rep: Methyl-accepting chemotaxis
protein - Idiomarina loihiensis
Length = 663
Score = 33.1 bits (72), Expect = 4.0
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = -2
Query: 205 SAGETLVLLWVIVLQTNLKLYSLQKVTFLVLRGLKNGIHALVERV 71
+A ETL LW++V+ + + ++ +TF +L+G+ + + L+E +
Sbjct: 301 TASETLSQLWLLVILISAFILAIVVLTFFILKGIYSQVRELLEGI 345
>UniRef50_P13575 Cluster: 50S ribosomal protein L1P; n=5;
Euryarchaeota|Rep: 50S ribosomal protein L1P -
Halobacterium salinarium (Halobacterium halobium)
Length = 212
Score = 33.1 bits (72), Expect = 4.0
Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 2/145 (1%)
Frame = +2
Query: 95 AVLQSSKDK-KRNFLETVELQIGLKNYD-PQKDKRFSGTVKLKYIPRPKMQVCVLGDQQH 268
AV ++ +D +RNF ETV+L + L++ D +R V L + Q+ V D +
Sbjct: 9 AVARALEDAPQRNFRETVDLAVNLRDLDLNDPSQRVDEGVVLPSGTGQETQIVVFADGET 68
Query: 269 CDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNKAGK 448
A + + +++ I LG L GK
Sbjct: 69 AVRADDVADDVLDEDDLSDLADDTDAAKDLADETDFFVAEAPMMQDIAGALGQVLGPRGK 128
Query: 449 FPGLLSHQESMTQKIDEVKGTIKFQ 523
P L + + ++ +K T++ +
Sbjct: 129 MPTPLQPDDDVVDTVNRMKNTVQIR 153
>UniRef50_A3XWB4 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio sp. MED222
Length = 1130
Score = 32.3 bits (70), Expect = 7.0
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 389 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIK 517
+SL PR GL LL + E +TQK DE+K TIK
Sbjct: 179 QSLTAWRPRQAANGLLLTTDVASLLENNEQITQKADELKSTIK 221
>UniRef50_Q97BN2 Cluster: 50S ribosomal protein L1P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L1P -
Thermoplasma volcanium
Length = 217
Score = 31.9 bits (69), Expect = 9.3
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 1/146 (0%)
Frame = +2
Query: 83 ECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDK-RFSGTVKLKYIPRPKMQVCVLGD 259
+ V AV QSS +K F E+VE+ I LK+ D K R + + L ++V + G
Sbjct: 8 KAVEAVKQSSPQRK--FEESVEIAINLKDIDMTNPKNRINEEILLPNGRGKDVKVVIFGS 65
Query: 260 QQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGPGLNK 439
++ +AK + +L+ I + LG L
Sbjct: 66 EELKAKAKGVADYIFGPEDISKFAEDKKAFKKIVNDAYFFIAEATLMANIGKSLGQVLGP 125
Query: 440 AGKFPGLLSHQESMTQKIDEVKGTIK 517
GK P + + I +K T+K
Sbjct: 126 RGKMPRPIPPGQDPVPLIKALKNTVK 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,895,933
Number of Sequences: 1657284
Number of extensions: 9728426
Number of successful extensions: 25058
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 24537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25046
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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