Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f17r
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29062-1|CAA82304.1|  549|Drosophila melanogaster glutamate dehy...   233   1e-61
BT001501-1|AAN71256.1|  399|Drosophila melanogaster LD34409p pro...   233   1e-61
AE014297-3417|AAN13963.2|  333|Drosophila melanogaster CG5320-PE...   233   1e-61
AE014297-3414|AAS65200.1|  549|Drosophila melanogaster CG5320-PF...   233   1e-61
Y11314-1|CAA72173.1|  562|Drosophila melanogaster glutamate dehy...   219   2e-57
AY061323-1|AAL28871.1|  562|Drosophila melanogaster LD23954p pro...   219   2e-57
AE014297-3416|AAN13962.1|  404|Drosophila melanogaster CG5320-PB...   219   2e-57
AE014297-3415|AAF56209.5|  562|Drosophila melanogaster CG5320-PA...   219   2e-57
BT015308-1|AAT94536.1|  535|Drosophila melanogaster AT14166p pro...    69   8e-12
AY089348-1|AAL90086.1|  304|Drosophila melanogaster AT16683p pro...    69   8e-12
AE014297-3312|AAF56124.2|  535|Drosophila melanogaster CG4434-PA...    69   8e-12
AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinate...    29   5.9  
AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p pro...    29   5.9  
AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA...    29   5.9  
BT025105-1|ABE73276.1|  358|Drosophila melanogaster IP10818p pro...    29   7.8  

>Z29062-1|CAA82304.1|  549|Drosophila melanogaster glutamate
           dehydrogenase, shortpeptide protein.
          Length = 549

 Score =  233 bits (571), Expect = 1e-61
 Identities = 111/116 (95%), Positives = 114/116 (98%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 503
           WLK+LNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS
Sbjct: 434 WLKNLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 493

Query: 502 EKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFTTYADAGLAF 335
           EKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFTTY DAGLAF
Sbjct: 494 EKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFTTYRDAGLAF 549


>BT001501-1|AAN71256.1|  399|Drosophila melanogaster LD34409p
           protein.
          Length = 399

 Score =  233 bits (571), Expect = 1e-61
 Identities = 111/116 (95%), Positives = 114/116 (98%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 503
           WLK+LNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS
Sbjct: 284 WLKNLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 343

Query: 502 EKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFTTYADAGLAF 335
           EKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFTTY DAGLAF
Sbjct: 344 EKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFTTYRDAGLAF 399


>AE014297-3417|AAN13963.2|  333|Drosophila melanogaster CG5320-PE,
           isoform E protein.
          Length = 333

 Score =  233 bits (571), Expect = 1e-61
 Identities = 111/116 (95%), Positives = 114/116 (98%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 503
           WLK+LNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS
Sbjct: 218 WLKNLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 277

Query: 502 EKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFTTYADAGLAF 335
           EKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFTTY DAGLAF
Sbjct: 278 EKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFTTYRDAGLAF 333


>AE014297-3414|AAS65200.1|  549|Drosophila melanogaster CG5320-PF,
           isoform F protein.
          Length = 549

 Score =  233 bits (571), Expect = 1e-61
 Identities = 111/116 (95%), Positives = 114/116 (98%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 503
           WLK+LNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS
Sbjct: 434 WLKNLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGAS 493

Query: 502 EKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFTTYADAGLAF 335
           EKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFTTY DAGLAF
Sbjct: 494 EKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFTTYRDAGLAF 549


>Y11314-1|CAA72173.1|  562|Drosophila melanogaster glutamate
           dehydrogenase (NAD(P)+) protein.
          Length = 562

 Score =  219 bits (536), Expect = 2e-57
 Identities = 111/129 (86%), Positives = 114/129 (88%), Gaps = 13/129 (10%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLL-------------ESVQESLERRFGRVGGRIPVT 542
           WLK+LNHVSYGRLTFKYERESNYHLL             ESVQESLERRFGRVGGRIPVT
Sbjct: 434 WLKNLNHVSYGRLTFKYERESNYHLLASVQQSIERIINDESVQESLERRFGRVGGRIPVT 493

Query: 541 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFT 362
           PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFT
Sbjct: 494 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFT 553

Query: 361 TYADAGLAF 335
           TY DAGLAF
Sbjct: 554 TYRDAGLAF 562


>AY061323-1|AAL28871.1|  562|Drosophila melanogaster LD23954p
           protein.
          Length = 562

 Score =  219 bits (536), Expect = 2e-57
 Identities = 111/129 (86%), Positives = 114/129 (88%), Gaps = 13/129 (10%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLL-------------ESVQESLERRFGRVGGRIPVT 542
           WLK+LNHVSYGRLTFKYERESNYHLL             ESVQESLERRFGRVGGRIPVT
Sbjct: 434 WLKNLNHVSYGRLTFKYERESNYHLLASVQQSIERIINDESVQESLERRFGRVGGRIPVT 493

Query: 541 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFT 362
           PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFT
Sbjct: 494 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFT 553

Query: 361 TYADAGLAF 335
           TY DAGLAF
Sbjct: 554 TYRDAGLAF 562


>AE014297-3416|AAN13962.1|  404|Drosophila melanogaster CG5320-PB,
           isoform B protein.
          Length = 404

 Score =  219 bits (536), Expect = 2e-57
 Identities = 111/129 (86%), Positives = 114/129 (88%), Gaps = 13/129 (10%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLL-------------ESVQESLERRFGRVGGRIPVT 542
           WLK+LNHVSYGRLTFKYERESNYHLL             ESVQESLERRFGRVGGRIPVT
Sbjct: 276 WLKNLNHVSYGRLTFKYERESNYHLLASVQQSIERIINDESVQESLERRFGRVGGRIPVT 335

Query: 541 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFT 362
           PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFT
Sbjct: 336 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFT 395

Query: 361 TYADAGLAF 335
           TY DAGLAF
Sbjct: 396 TYRDAGLAF 404


>AE014297-3415|AAF56209.5|  562|Drosophila melanogaster CG5320-PA,
           isoform A protein.
          Length = 562

 Score =  219 bits (536), Expect = 2e-57
 Identities = 111/129 (86%), Positives = 114/129 (88%), Gaps = 13/129 (10%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLL-------------ESVQESLERRFGRVGGRIPVT 542
           WLK+LNHVSYGRLTFKYERESNYHLL             ESVQESLERRFGRVGGRIPVT
Sbjct: 434 WLKNLNHVSYGRLTFKYERESNYHLLASVQQSIERIINDESVQESLERRFGRVGGRIPVT 493

Query: 541 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFT 362
           PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAM++NLGLDLRTAAY NSIEKIFT
Sbjct: 494 PSESFQKRISGASEKDIVHSGLDYTMERSARAIMKTAMKYNLGLDLRTAAYVNSIEKIFT 553

Query: 361 TYADAGLAF 335
           TY DAGLAF
Sbjct: 554 TYRDAGLAF 562


>BT015308-1|AAT94536.1|  535|Drosophila melanogaster AT14166p
           protein.
          Length = 535

 Score = 68.5 bits (160), Expect = 8e-12
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIP-VTPSESFQKRISGA 506
           +LK++NHVSYG++  K   E    L+ S+ ESL         ++P + P++  ++     
Sbjct: 421 YLKNINHVSYGKMNSKSTSELIIELMNSINESLHEC---PDSQLPNICPNKKLKRIQQCT 477

Query: 505 SEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFTTYADAGLA 338
           +E DIV S L   ME +AR I + A +F L  DLR AAY  S  KIF     +G++
Sbjct: 478 TEADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIFQAMESSGIS 533


>AY089348-1|AAL90086.1|  304|Drosophila melanogaster AT16683p
           protein.
          Length = 304

 Score = 68.5 bits (160), Expect = 8e-12
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIP-VTPSESFQKRISGA 506
           +LK++NHVSYG++  K   E    L+ S+ ESL         ++P + P++  ++     
Sbjct: 190 YLKNINHVSYGKMNSKSTSELIIELMNSINESLHEC---PDSQLPNICPNKKLKRIQQCT 246

Query: 505 SEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFTTYADAGLA 338
           +E DIV S L   ME +AR I + A +F L  DLR AAY  S  KIF     +G++
Sbjct: 247 TEADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIFQAMESSGIS 302


>AE014297-3312|AAF56124.2|  535|Drosophila melanogaster CG4434-PA
           protein.
          Length = 535

 Score = 68.5 bits (160), Expect = 8e-12
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = -2

Query: 682 WLKDLNHVSYGRLTFKYERESNYHLLESVQESLERRFGRVGGRIP-VTPSESFQKRISGA 506
           +LK++NHVSYG++  K   E    L+ S+ ESL         ++P + P++  ++     
Sbjct: 421 YLKNINHVSYGKMNSKSTSELIIELMNSINESLHEC---PDSQLPNICPNKKLKRIQQCT 477

Query: 505 SEKDIVHSGLDYTMERSARAIMKTAMRFNLGLDLRTAAYANSIEKIFTTYADAGLA 338
           +E DIV S L   ME +AR I + A +F L  DLR AAY  S  KIF     +G++
Sbjct: 478 TEADIVDSALQTVMESAARGIKEMAHKFELCNDLRRAAYVWSSFKIFQAMESSGIS 533


>AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinated
           protein.
          Length = 1386

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/66 (22%), Positives = 30/66 (45%)
 Frame = +2

Query: 416 EVEPHGCLHDGPSGSLHGVVESGVHDVLLGGAGDSLLEGL*GSDGDAASHATEPPLERLL 595
           + EP  C+   P     G+ ++  H+++LG  G S+     G     + H+ E  L +L+
Sbjct: 343 QTEPSACVEARPEVDTTGLYQTEEHELILGADGRSVFV---GGRVSQSLHSVEQQLNQLI 399

Query: 596 DRFQQM 613
              + +
Sbjct: 400 KNLRHL 405


>AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p
           protein.
          Length = 1228

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/66 (22%), Positives = 30/66 (45%)
 Frame = +2

Query: 416 EVEPHGCLHDGPSGSLHGVVESGVHDVLLGGAGDSLLEGL*GSDGDAASHATEPPLERLL 595
           + EP  C+   P     G+ ++  H+++LG  G S+     G     + H+ E  L +L+
Sbjct: 185 QTEPSACVEARPEVDTTGLYQTEEHELILGADGRSVFV---GGRVSQSLHSVEQQLNQLI 241

Query: 596 DRFQQM 613
              + +
Sbjct: 242 KNLRHL 247


>AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA
           protein.
          Length = 1386

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/66 (22%), Positives = 30/66 (45%)
 Frame = +2

Query: 416 EVEPHGCLHDGPSGSLHGVVESGVHDVLLGGAGDSLLEGL*GSDGDAASHATEPPLERLL 595
           + EP  C+   P     G+ ++  H+++LG  G S+     G     + H+ E  L +L+
Sbjct: 343 QTEPSACVEARPEVDTTGLYQTEEHELILGADGRSVFV---GGRVSQSLHSVEQQLNQLI 399

Query: 596 DRFQQM 613
              + +
Sbjct: 400 KNLRHL 405


>BT025105-1|ABE73276.1|  358|Drosophila melanogaster IP10818p
           protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 649 RLTFKYERESNYHLLESVQESLERRFGRVGGRIPVTPSESFQKRISGASEK 497
           R+TF+ E E NYH++  +    ++  G +     + P+E ++   +  SEK
Sbjct: 122 RITFQSEGERNYHIMYQLVAQGQKNIG-IANTFHLRPAEFYKYLNTSNSEK 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,895,665
Number of Sequences: 53049
Number of extensions: 644473
Number of successful extensions: 1669
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)