Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l14r
         (748 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F33580 Cluster: UPI0000F33580 related cluster; n...    36   1.1  
UniRef50_Q970J8 Cluster: Putative uncharacterized protein ST1597...    34   4.3  
UniRef50_Q02VY2 Cluster: Transcriptional regulator; n=1; Lactoco...    33   5.6  
UniRef50_A2TYI2 Cluster: Putative outer membrane protein probabl...    33   9.9  

>UniRef50_UPI0000F33580 Cluster: UPI0000F33580 related cluster; n=1;
           Bos taurus|Rep: UPI0000F33580 UniRef100 entry - Bos
           Taurus
          Length = 269

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = +1

Query: 103 VVIEPIS*LLGTLIKLHFVLQIVQHTFYSQFLNSILINTYPTIYKTTLL 249
           +++ P + LL + I+  F+L +  H+++S FLN IL+ T     +T +L
Sbjct: 151 LLLFPFARLLSSFIEFFFILLVFLHSYFSWFLNYILLITLEKFSRTKML 199


>UniRef50_Q970J8 Cluster: Putative uncharacterized protein ST1597;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST1597 - Sulfolobus tokodaii
          Length = 376

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +1

Query: 151 HFVLQIVQHTFYSQFLNSILINTYPTIYKTTLL*SMKFIYIDKRDHRK 294
           +FV  I  H  YS++++ + +NT+P I+  T++ S    Y+  R+  K
Sbjct: 265 YFVHLIFVHVTYSEYISPLTLNTFPLIFMPTVIFSTLADYLRGRELNK 312


>UniRef50_Q02VY2 Cluster: Transcriptional regulator; n=1;
           Lactococcus lactis subsp. cremoris SK11|Rep:
           Transcriptional regulator - Lactococcus lactis subsp.
           cremoris (strain SK11)
          Length = 201

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 133 GTLIKLHFVLQIVQHTFYSQFLNSILINTYPTIYKTTLL 249
           GT   +  VL  V+H F+SQ L  IL  ++ T YK  +L
Sbjct: 57  GTTKNIGVVLSYVKHPFFSQILEEILDKSFETGYKIVIL 95


>UniRef50_A2TYI2 Cluster: Putative outer membrane protein probably
           involved in nutrient binding; n=1; Polaribacter
           dokdonensis MED152|Rep: Putative outer membrane protein
           probably involved in nutrient binding - Polaribacter
           dokdonensis MED152
          Length = 1042

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
 Frame = -2

Query: 528 ISNLLLF--YILSATTTTSQKGSFIMNSF*ILNTVYSTDNNVSYFNKMPSNQ*LKTSTVI 355
           ISN LL   Y+ +  T  +  GSF MN +   NT+ + D    Y   +  +  L     +
Sbjct: 423 ISNSLLANNYLKADGTPNNWAGSFTMNPYYATNTLLNEDETNRYIGLISLDIDLLEGLKL 482

Query: 354 N-EVVDKLEYARAFIQRFPATFSVISFINVDKFH 256
           N      L +  AFI R    F +     +D+F+
Sbjct: 483 NARASQDLSFTNAFIYREKGAFDIAPNGKLDEFN 516


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,862,205
Number of Sequences: 1657284
Number of extensions: 11302380
Number of successful extensions: 24045
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24031
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)