Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j24f
         (540 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    27   0.30 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.7  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +1

Query: 112 LFFIAHWARMEST--GPF-QPWANDENSKDVKSEAELADDAK 228
           +FFIAH   M ST   PF   W ND   K+ K      D ++
Sbjct: 361 IFFIAHLTAMSSTCYNPFLYAWLNDNFRKEFKQVLPCFDPSR 402


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +1

Query: 175  DENSKDVKSEAELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSS 324
            D   K+VK E + A+D +   E+    +  +     +E      +AP SS
Sbjct: 951  DGLQKEVKKEVDAAEDDEEEEEEEQEEEEDEDEEGGEEHGQREASAPSSS 1000


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 426 LTESVLNYLLHRSYFVRV 373
           L + + +YL+HR+Y V++
Sbjct: 712 LVQWLKSYLIHRTYIVKI 729


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,664
Number of Sequences: 2352
Number of extensions: 9508
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)