Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j03r
(551 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 255 3e-68
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 255 3e-68
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 255 3e-68
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 255 3e-68
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 252 2e-67
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 32 0.59
AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA ... 29 5.5
AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-P... 28 7.3
AE013599-2581|AAM68475.1| 166|Drosophila melanogaster CG30323-P... 28 9.7
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 255 bits (624), Expect = 3e-68
Identities = 121/156 (77%), Positives = 130/156 (83%)
Frame = -2
Query: 550 VMRCVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 371
V+RC KKKVWLDPNEINEIANTNS QNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 19 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 78
Query: 370 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFK 191
RHCGFGKR+GTANARMP K LW R +KKIDRHLYH LYMK KGNVFK
Sbjct: 79 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 138
Query: 190 NKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEA 83
NKRVLMEYIH+KKAEK R+KML+DQAEA R KV+EA
Sbjct: 139 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREA 174
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 255 bits (624), Expect = 3e-68
Identities = 121/156 (77%), Positives = 130/156 (83%)
Frame = -2
Query: 550 VMRCVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 371
V+RC KKKVWLDPNEINEIANTNS QNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 32 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 91
Query: 370 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFK 191
RHCGFGKR+GTANARMP K LW R +KKIDRHLYH LYMK KGNVFK
Sbjct: 92 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 151
Query: 190 NKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEA 83
NKRVLMEYIH+KKAEK R+KML+DQAEA R KV+EA
Sbjct: 152 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREA 187
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 255 bits (624), Expect = 3e-68
Identities = 121/156 (77%), Positives = 130/156 (83%)
Frame = -2
Query: 550 VMRCVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 371
V+RC KKKVWLDPNEINEIANTNS QNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 14 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 73
Query: 370 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFK 191
RHCGFGKR+GTANARMP K LW R +KKIDRHLYH LYMK KGNVFK
Sbjct: 74 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 133
Query: 190 NKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEA 83
NKRVLMEYIH+KKAEK R+KML+DQAEA R KV+EA
Sbjct: 134 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREA 169
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 255 bits (624), Expect = 3e-68
Identities = 121/156 (77%), Positives = 130/156 (83%)
Frame = -2
Query: 550 VMRCVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 371
V+RC KKKVWLDPNEINEIANTNS QNIRK+IKDGL+IKKPV VHSR RVRKNTEARRKG
Sbjct: 14 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKG 73
Query: 370 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFK 191
RHCGFGKR+GTANARMP K LW R +KKIDRHLYH LYMK KGNVFK
Sbjct: 74 RHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 133
Query: 190 NKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEA 83
NKRVLMEYIH+KKAEK R+KML+DQAEA R KV+EA
Sbjct: 134 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREA 169
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 252 bits (617), Expect = 2e-67
Identities = 120/156 (76%), Positives = 129/156 (82%)
Frame = -2
Query: 550 VMRCVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 371
V+RC KKKVWLDPNEINEIANTNS QNIRK+IKDGL+IKKPV VHSR RVRKNTEARRK
Sbjct: 14 VLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKD 73
Query: 370 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFK 191
RHCGFGKR+GTANARMP K LW R +KKIDRHLYH LYMK KGNVFK
Sbjct: 74 RHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFK 133
Query: 190 NKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEA 83
NKRVLMEYIH+KKAEK R+KML+DQAEA R KV+EA
Sbjct: 134 NKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREA 169
>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
protein.
Length = 1718
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 168 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 341
YS++ +L L +YR FL +++ NF TLC C +S FCG A V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376
>AE014135-39|AAF59363.2| 1459|Drosophila melanogaster CG31998-PA
protein.
Length = 1459
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 66 PRGACDASFTLLRXASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLS 245
P GA A+ A AW++ I++ L +YS+ L N L F ++ C++
Sbjct: 597 PIGAAAAATVHTTWAWAWNIHIYLSVVLFTILSVYSLYKLLTYNKLTHLFA-QAYFVCIN 655
Query: 246 IFLAVL-YFRSNFLRTLCLCTHSSF 317
+ L ++ R FL H SF
Sbjct: 656 LILIMICILRIFFLCFDAYNVHGSF 680
>AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-PA
protein.
Length = 267
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Frame = +1
Query: 199 HYPSPS-CRVS-GIDACQSSWQFCTSGAIFLEPFV----FVPIVPSVAYAHWQYLFSYQS 360
H P P+ C++ G C+ + +G L P+ P V + AHW + Y
Sbjct: 128 HMPGPAACQLHVGPLDCKKVKELLKAGGCLLVPYDADVNHAPCVKNGHRAHWALIVGYLV 187
Query: 361 HSDDPFYVPLCFCGHGRGSGL 423
+ D FYV HG+ L
Sbjct: 188 DTQDRFYV---LARHGKSRNL 205
>AE013599-2581|AAM68475.1| 166|Drosophila melanogaster CG30323-PA
protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 377 STCLCVFADTGAGVDCYRFLDDETILDH-LTDVLXGVGVCD 496
S CLC+ + TG G C + L DH L V V CD
Sbjct: 75 SRCLCMTSYTGRGNMCQQDLGSPLFCDHFLYGVARRVHTCD 115
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,421,698
Number of Sequences: 53049
Number of extensions: 515001
Number of successful extensions: 1506
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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