Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N17
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.7  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 337 FPHTDFTLCKCLLLESVVENETIS 408
           F   DF+LCK +L+ ++    T S
Sbjct: 78  FTVIDFSLCKAILVHAITIRSTFS 101


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 114 CICH*CY*FIKE 79
           CICH CY  I+E
Sbjct: 924 CICHVCYSTIQE 935


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 469 LYSKTEQSHIAPECRLSI*FEKLSHF 392
           +Y + ++  I   CR SI    L+HF
Sbjct: 45  MYHRVKEEPIYESCRFSINQPYLNHF 70


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 469 LYSKTEQSHIAPECRLSI*FEKLSHF 392
           +Y + ++  I   CR SI    L+HF
Sbjct: 45  MYHRVKEEPIYESCRFSINQPYLNHF 70


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 309 TCNVCVKLFGIKLI*LEH 256
           TC VC + FG K +   H
Sbjct: 136 TCEVCNRSFGYKHVLQNH 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,578
Number of Sequences: 336
Number of extensions: 2931
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)