Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N15
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      31   0.008
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      31   0.008
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.41 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.41 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 136 PLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQPLTSSQEYLELXK-XESD 312
           PL+LT   I+K+PI  VAP+   E  ++ +HE DLP  +S +   ++ + L+L K  E++
Sbjct: 265 PLNLT---IKKMPIAIVAPFTIVE-PKLNKHE-DLPQDLSMKLSKNNDQCLDLSKTKETN 319

Query: 313 IXK 321
           + K
Sbjct: 320 LEK 322


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 136 PLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSISRQPLTSSQEYLELXK-XESD 312
           PL+LT   I+K+PI  VAP+   E  ++ +HE DLP  +S +   ++ + L+L K  E++
Sbjct: 157 PLNLT---IKKMPIAIVAPFTIVE-PKLNKHE-DLPQDLSMKLSKNNDQCLDLSKTKETN 211

Query: 313 IXK 321
           + K
Sbjct: 212 LEK 214


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 201 TVVWCHKLNRQFFNV*LSQVKRRLF 127
           T+ WC+KL  QF  V  S+V+  LF
Sbjct: 308 TISWCYKLQEQF--VTNSEVRTELF 330


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 201 TVVWCHKLNRQFFNV*LSQVKRRLF 127
           T+ WC+KL  QF  V  S+V+  LF
Sbjct: 308 TISWCYKLQEQF--VTNSEVRTELF 330


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 641 CYFQLVSNKHLFLFFI 594
           CYF +  N H F F+I
Sbjct: 513 CYFMIGLNSHGFRFYI 528


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/48 (20%), Positives = 21/48 (43%)
 Frame = +1

Query: 112 STTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPPSIS 255
           +T P K    +    +IE++ +  V  +HS  +H      +  P  ++
Sbjct: 44  ATAPQKPDKWEDVMADIERVIMPGVTHWHSPRFHAYFPTANSYPAIVA 91


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +3

Query: 348  VAVLSMFVLMVIILILRFGAQWCKLRHTTYADQDEWNEXEAYEQK 482
            V V SM++L+VI  +          R  T   + + N  +  E+K
Sbjct: 1010 VTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAVQKIEEK 1054


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +3

Query: 348  VAVLSMFVLMVIILILRFGAQWCKLRHTTYADQDEWNEXEAYEQK 482
            V V SM++L+VI  +          R  T   + + N  +  E+K
Sbjct: 1010 VTVPSMYLLLVIYSVFNMNNVSWGTREVTVVPKPDPNAVQKIEEK 1054


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,967
Number of Sequences: 336
Number of extensions: 2540
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)