Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N13
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   4.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.1  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   8.1  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   8.1  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 228 KSCASFDLVSELNCCSKVLWNCLGVVFDVLEEVGSVASH 112
           KS A+FD V+  +    +LW       DV+E+  S A +
Sbjct: 418 KSLAAFDFVARNSDTPIILWTSHLTQADVIEKYLSKARY 456


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 115 RRDAPDFFKDIEH 153
           RR AP  F+DI+H
Sbjct: 84  RRKAPQSFEDIQH 96


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 384  GAPRPCARCSASTVPKPPWPCRSRLRAL 301
            G P+P + CS +     P  C   L  L
Sbjct: 1271 GGPQPYSACSENAFAAYPGDCTRYLHCL 1298


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 297 RAALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 404
           R  LGD + K   +  Q+ + +ER  +E  + +P V
Sbjct: 27  RDVLGDIHAKPTYSDLQNLKYLERCIKESLRLYPSV 62


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 143 SLKKSGASRRTIAALGQSDAGEENYELGGHDVLSR 39
           +LK    + +T+ A+G  + G E Y     D   R
Sbjct: 88  ALKVKNPNLKTLIAIGGWNEGSETYSQVAADAAKR 122


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 121 DAPDFFKDIEHHTKAV 168
           D P  FK+IE H  A+
Sbjct: 37  DTPLSFKNIESHLNAI 52


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 406 STSGWALRSSSAVRSMFCLDCSK 338
           ST    LR+ S  +   C+DC+K
Sbjct: 7   STLKTHLRTHSGEKPYRCIDCNK 29


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 406 STSGWALRSSSAVRSMFCLDCSK 338
           ST    LR+ S  +   C+DC+K
Sbjct: 263 STLKTHLRTHSGEKPYRCIDCNK 285


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 262 AATAQRLRQESPGQRSETRTARPRRL 339
           A+TA      SP Q  E  + RP  L
Sbjct: 207 ASTASSASNYSPSQSPEPESVRPLSL 232


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 297 RAALGDANGKAKEALEQSRQNIERTAEELRKAHPDV 404
           R  LGD + K      Q+ + +ER  +E  + +P V
Sbjct: 27  REVLGDLSKKPSYNDLQNLKYLERCIKETLRLYPSV 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,005
Number of Sequences: 336
Number of extensions: 1425
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)